Miyakogusa Predicted Gene

Lj1g3v4862950.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4862950.1 Non Chatacterized Hit- tr|D7M453|D7M453_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,39.9,7e-19,DUF4228,Protein of unknown function DUF4228;
seg,NULL,CUFF.33472.1
         (592 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67980 similar to UniRef100_A7Q0L4 Cluster: Chromosome...  1174   0.0  

>gnl|LJGI|TC67980 similar to UniRef100_A7Q0L4 Cluster: Chromosome chr7 scaffold_42,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_42, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (38%)
          Length = 1069

 Score = 1174 bits (592), Expect = 0.0
 Identities = 592/592 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggaaaccacatatcatcatttccagcttcagatgccacagggaaaatcgtttactgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 atgggaaaccacatatcatcatttccagcttcagatgccacagggaaaatcgtttactgt 245

                                                                       
Query: 61  gatggctcagttcaagaatttgaccaacctctaacagtggcagagctcatgctagagcac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gatggctcagttcaagaatttgaccaacctctaacagtggcagagctcatgctagagcac 305

                                                                       
Query: 121 ccacaacaggtagtggtggagttccattcagcattgaaccaccagaaaagaccaacacca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ccacaacaggtagtggtggagttccattcagcattgaaccaccagaaaagaccaacacca 365

                                                                       
Query: 181 ttgccagctgacaagaagctagagatgaagaaaacatatgtaatgcttccgatgaagcga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ttgccagctgacaagaagctagagatgaagaaaacatatgtaatgcttccgatgaagcga 425

                                                                       
Query: 241 gggaagccagtggggctgagcggtgaagattgccaccgcgttctatccatcgttaactct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gggaagccagtggggctgagcggtgaagattgccaccgcgttctatccatcgttaactct 485

                                                                       
Query: 301 tctctgcattccaactatctcatgtgttcaggctttcttccttggattgccagagtattt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tctctgcattccaactatctcatgtgttcaggctttcttccttggattgccagagtattt 545

                                                                       
Query: 361 aaaacagagtcccctgcaaatggtgtggctgaaaccttgcagataaaggaagaaaggtac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 aaaacagagtcccctgcaaatggtgtggctgaaaccttgcagataaaggaagaaaggtac 605

                                                                       
Query: 421 gacttttctgagtttttgccagagatgattgaagagaggccagaatacatgagtaggcag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gacttttctgagtttttgccagagatgattgaagagaggccagaatacatgagtaggcag 665

                                                                       
Query: 481 ttgtcagggaaggagtggaagcctagcttggacaccattaaggagaagaagattaagaaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 ttgtcagggaaggagtggaagcctagcttggacaccattaaggagaagaagattaagaaa 725

                                                               
Query: 541 aaactatctcgctggtttttcctcaaaagttttattggtacaaggatttaaa 592
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 aaactatctcgctggtttttcctcaaaagttttattggtacaaggatttaaa 777