Miyakogusa Predicted Gene
- Lj1g3v4830140.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4830140.1 Non Chatacterized Hit- tr|I1LYP3|I1LYP3_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,48.62,3e-19,IAA_ARF,Aux/IAA-ARF-dimerisation; FAMILY NOT
NAMED,NULL; AUX_IAA,AUX/IAA protein; seg,NULL; CAD & PB,CUFF.33363.1
(516 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66661 similar to UniRef100_Q8RVH6 Cluster: Aux/IAA pr... 1021 0.0
gnl|LJGI|TC57928 similar to UniRef100_Q8RVH7 Cluster: Aux/IAA pr... 293 5e-79
gnl|LJGI|TC73899 similar to UniRef100_A7Q0Y6 Cluster: Chromosome... 149 2e-35
gnl|LJGI|FS333032 similar to UniRef100_Q8RVH6 Cluster: Aux/IAA p... 147 8e-35
gnl|LJGI|TC66588 similar to UniRef100_A7NW11 Cluster: Chromosome... 76 2e-13
gnl|LJGI|TC78163 similar to UniRef100_A7NW11 Cluster: Chromosome... 72 4e-12
>gnl|LJGI|TC66661 similar to UniRef100_Q8RVH6 Cluster: Aux/IAA protein; n=1; Populus
tremula x Populus tremuloides|Rep: Aux/IAA protein -
Populus tremula x Populus tremuloides, partial (66%)
Length = 793
Score = 1021 bits (515), Expect = 0.0
Identities = 515/515 (100%)
Strand = Plus / Plus
Query: 2 tgggaaaagccactagttcttcctcttcttcaattagcagcaccaacaacccccgctttg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 tgggaaaagccactagttcttcctcttcttcaattagcagcaccaacaacccccgctttg 68
Query: 62 ttctttcaactgcatcctctctcacacaattcaacacacaagaacttcccacagatctta 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 ttctttcaactgcatcctctctcacacaattcaacacacaagaacttcccacagatctta 128
Query: 122 ggcttggaccaagcatttcagcctctatgttaagggggcaatggcaaccaaaccacccat 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 ggcttggaccaagcatttcagcctctatgttaagggggcaatggcaaccaaaccacccat 188
Query: 182 ctgggagaaactcacaaggtgctgaagtaaatgattgcagtgatagcagcttctttgtga 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ctgggagaaactcacaaggtgctgaagtaaatgattgcagtgatagcagcttctttgtga 248
Query: 242 aggtgtacatggaaggcattccaattggcagaaaactcaatatactagctcatggtggtt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aggtgtacatggaaggcattccaattggcagaaaactcaatatactagctcatggtggtt 308
Query: 302 actatgagttagtaaagactcttgagaacatgtttgacactaccattctatggggaacag 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 actatgagttagtaaagactcttgagaacatgtttgacactaccattctatggggaacag 368
Query: 362 agatggatggagttcaaccagagagatgccatgtgctaacttatgaagatgaagaagggg 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 agatggatggagttcaaccagagagatgccatgtgctaacttatgaagatgaagaagggg 428
Query: 422 atttggtcatggttggggatgtcccttgggagatgtttttatccactgtaaagaggttga 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 atttggtcatggttggggatgtcccttgggagatgtttttatccactgtaaagaggttga 488
Query: 482 agatcaccagggtagacacattcgggtgttgaaga 516
|||||||||||||||||||||||||||||||||||
Sbjct: 489 agatcaccagggtagacacattcgggtgttgaaga 523
>gnl|LJGI|TC57928 similar to UniRef100_Q8RVH7 Cluster: Aux/IAA protein; n=1; Populus
tremula x Populus tremuloides|Rep: Aux/IAA protein -
Populus tremula x Populus tremuloides, partial (57%)
Length = 1044
Score = 293 bits (148), Expect = 5e-79
Identities = 273/314 (86%), Gaps = 3/314 (0%)
Strand = Plus / Plus
Query: 193 tcacaaggtgctgaagtaaatgattgcagtgat---agcagcttctttgtgaaggtgtac 249
||||||| ||||||||| ||||||||||||||| | |||||||||||||||||| |||
Sbjct: 237 tcacaagctgctgaagtgaatgattgcagtgatcataacagcttctttgtgaaggtctac 296
Query: 250 atggaaggcattccaattggcagaaaactcaatatactagctcatggtggttactatgag 309
|||||||||||||||||||| |||||||| ||| |||||| ||| ||| ||| | ||
Sbjct: 297 atggaaggcattccaattggaagaaaactgaatttactagttcacaatgggtaccaagaa 356
Query: 310 ttagtaaagactcttgagaacatgtttgacactaccattctatggggaacagagatggat 369
|||||||||||||||| | |||||||||||||||||||||||||| || |||||||||
Sbjct: 357 ctagtaaagactcttgaacatatgtttgacactaccattctatgggggactgagatggat 416
Query: 370 ggagttcaaccagagagatgccatgtgctaacttatgaagatgaagaaggggatttggtc 429
||||| ||| ||||||| ||||||||||||||||||||||||| |||||| || ||| |
Sbjct: 417 ggagtgcaatcagagaggtgccatgtgctaacttatgaagatggagaaggagacttgatt 476
Query: 430 atggttggggatgtcccttgggagatgtttttatccactgtaaagaggttgaagatcacc 489
|||||||| ||||| |||||||| || || ||||| |||||||||||||||||||||||
Sbjct: 477 atggttggagatgttccttgggaaattttcttatcagctgtaaagaggttgaagatcacc 536
Query: 490 agggtagacacatt 503
|||| ||||||||
Sbjct: 537 cgggttgacacatt 550
>gnl|LJGI|TC73899 similar to UniRef100_A7Q0Y6 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 760
Score = 149 bits (75), Expect = 2e-35
Identities = 126/143 (88%)
Strand = Plus / Plus
Query: 361 gagatggatggagttcaaccagagagatgccatgtgctaacttatgaagatgaagaaggg 420
|||||||||||||| ||| ||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 1 gagatggatggagtgcaatcagagaggtgccatgtgctaacttatgaagatggagaagga 60
Query: 421 gatttggtcatggttggggatgtcccttgggagatgtttttatccactgtaaagaggttg 480
|| ||| | |||||||| ||||| |||||||| || || ||||| ||||||||||||||
Sbjct: 61 gacttgattatggttggagatgttccttgggaaattttcttatcagctgtaaagaggttg 120
Query: 481 aagatcaccagggtagacacatt 503
||||||||| |||| ||||||||
Sbjct: 121 aagatcacccgggttgacacatt 143
>gnl|LJGI|FS333032 similar to UniRef100_Q8RVH6 Cluster: Aux/IAA protein; n=1; Populus
tremula x Populus tremuloides|Rep: Aux/IAA protein -
Populus tremula x Populus tremuloides, partial (30%)
Length = 753
Score = 147 bits (74), Expect = 8e-35
Identities = 142/164 (86%), Gaps = 3/164 (1%)
Strand = Plus / Plus
Query: 193 tcacaaggtgctgaagtaaatgattgcagtgat---agcagcttctttgtgaaggtgtac 249
||||||| ||||||||| ||||||||||||||| | |||||||||||||||||| |||
Sbjct: 476 tcacaagctgctgaagtgaatgattgcagtgatcataacagcttctttgtgaaggtctac 535
Query: 250 atggaaggcattccaattggcagaaaactcaatatactagctcatggtggttactatgag 309
|||||||||||||||||||| |||||||| ||| |||||| ||| ||| ||| | ||
Sbjct: 536 atggaaggcattccaattggaagaaaactgaatttactagttcacaatgggtaccaagaa 595
Query: 310 ttagtaaagactcttgagaacatgtttgacactaccattctatg 353
|||||||||||||||| | |||||||||||||||||||||||
Sbjct: 596 ctagtaaagactcttgaacatatgtttgacactaccattctatg 639
>gnl|LJGI|TC66588 similar to UniRef100_A7NW11 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (48%)
Length = 976
Score = 75.8 bits (38), Expect = 2e-13
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 391 catgtgctaacttatgaagatgaagaaggggatttggtcatggttggggatgtcccttgg 450
|||||||| || ||||| ||| |||||||||||| | | |||||||| ||||| ||||||
Sbjct: 565 catgtgctgacctatgaggatcaagaaggggattggatgatggttggagatgtgccttgg 624
Query: 451 gagatgtttttatccactgtaaagaggttgaagatcac 488
|||||||| || ||| ||| |||||| ||||||||||
Sbjct: 625 gagatgttcttgaccagtgtgaagaggctgaagatcac 662
>gnl|LJGI|TC78163 similar to UniRef100_A7NW11 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (46%)
Length = 572
Score = 71.9 bits (36), Expect = 4e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 391 catgtgctaacttatgaagatgaagaaggggatttggtcatggttggggatgtcccttgg 450
|||||||| |||||||| ||| |||||||||||| | | |||||||| ||||| ||||||
Sbjct: 503 catgtgctgacttatgaggatcaagaaggggattggatgatggttggagatgtgccttgg 562
Query: 451 gagatgtt 458
||||||||
Sbjct: 563 gagatgtt 570