Miyakogusa Predicted Gene

Lj1g3v4830130.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4830130.1 Non Chatacterized Hit- tr|I1NBJ2|I1NBJ2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.32846
PE,45.84,0,seg,NULL; HLH, helix-loop-helix DNA-binding
domain,Helix-loop-helix domain; HLH,Helix-loop-helix dom,CUFF.33362.1
         (1413 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO026179 homologue to UniRef100_Q4TAT9 Cluster: Chromos...   222   5e-57
gnl|LJGI|TC81436 similar to UniRef100_A7PRH3 Cluster: Chromosome...   115   8e-25

>gnl|LJGI|GO026179 homologue to UniRef100_Q4TAT9 Cluster: Chromosome undetermined
            SCAF7258  whole genome shotgun sequence; n=1; Tetraodon,
            partial (1%)
          Length = 235

 Score =  222 bits (112), Expect = 5e-57
 Identities = 112/112 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1302 ccctatcattggaaactcttcttctacacaacaaccatttatagcggcggcggaaccatt 1361
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ccctatcattggaaactcttcttctacacaacaaccatttatagcggcggcggaaccatt 60

                                                                
Query: 1362 gccttattctgcacccttaacaactttggaggcctcaaaccccaagaactga 1413
            ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   gccttattctgcacccttaacaactttggaggcctcaaaccccaagaactga 112


>gnl|LJGI|TC81436 similar to UniRef100_A7PRH3 Cluster: Chromosome chr14 scaffold_27,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr14 scaffold_27, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (8%)
          Length = 756

 Score =  115 bits (58), Expect = 8e-25
 Identities = 112/130 (86%)
 Strand = Plus / Plus

                                                                        
Query: 1005 gctcatacccaactgcaacaagattgataaagcttcaatgcttgacgatgccattgacta 1064
            ||||||||| || ||||| ||||  ||||||| ||||||||||||  ||||||| || ||
Sbjct: 8    gctcatacctaattgcaataagaaggataaagtttcaatgcttgatcatgccatcgaata 67

                                                                        
Query: 1065 tctaaagaccctcaaacatcagttacagattatgtcaatggggagagggctatgtatgcc 1124
            ||| ||||||||||||| ||| ||||||||||||||||||||  | ||||| ||||||||
Sbjct: 68   tcttaagaccctcaaacttcaattacagattatgtcaatgggtggtgggctttgtatgcc 127

                      
Query: 1125 acttatgatg 1134
             |||||||||
Sbjct: 128  tcttatgatg 137