Miyakogusa Predicted Gene
- Lj1g3v4171210.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4171210.3 Non Chatacterized Hit- tr|I1HX02|I1HX02_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,39.29,3e-18,coiled-coil,NULL; seg,NULL; FAMILY NOT NAMED,NULL;
A_thal_3526,Conserved hypothetical protein CHP015,CUFF.32058.3
(1248 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65427 similar to UniRef100_Q0E447 Cluster: Os02g01371... 1352 0.0
gnl|LJGI|TC73388 similar to UniRef100_Q0E447 Cluster: Os02g01371... 1015 0.0
gnl|LJGI|FS351566 similar to UniRef100_Q02CH3 Cluster: Methyltra... 180 1e-44
gnl|LJGI|TC70688 similar to UniRef100_Q66GM7 Cluster: At5g04090;... 96 6e-19
gnl|LJGI|TC57979 similar to UniRef100_A7QJJ9 Cluster: Chromosome... 96 6e-19
gnl|LJGI|GO010714 similar to UniRef100_Q66GM7 Cluster: At5g04090... 84 2e-15
gnl|LJGI|BW630177 similar to UniRef100_Q66GM7 Cluster: At5g04090... 74 2e-12
gnl|LJGI|GO016149 similar to UniRef100_Q66GM7 Cluster: At5g04090... 70 4e-11
>gnl|LJGI|TC65427 similar to UniRef100_Q0E447 Cluster: Os02g0137100 protein; n=2;
Oryza sativa Japonica Group|Rep: Os02g0137100 protein -
Oryza sativa subsp. japonica (Rice), partial (26%)
Length = 772
Score = 1352 bits (682), Expect = 0.0
Identities = 685/686 (99%)
Strand = Plus / Plus
Query: 1 atgccaagcggaccaggcgaaccgggcggaccggtgagacaggtttcctgtcaagatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 atgccaagcggaccaggcgaaccgggcggaccggtgagacaggtttcctgtcaagatatt 146
Query: 61 cagctggtgcaaaatctcatagaacgatgtttacaactgtatatgagtcggcaagaagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 cagctggtgcaaaatctcatagaacgatgtttacaactgtatatgagtcggcaagaagtt 206
Query: 121 gtggacaaattagtatgccaagcaaaaatagagcccagtttcactgaactagtttggcaa 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gtggacaaattagtatgtcaagcaaaaatagagcccagtttcactgaactagtttggcaa 266
Query: 181 aagcttgaggaagaaaatgaagaattcttccgagcttattatacaagattgatgttaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aagcttgaggaagaaaatgaagaattcttccgagcttattatacaagattgatgttaaag 326
Query: 241 cagcaaatagtggaattcaacagattgctggatcaacagttgcatttaatgcactcaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 cagcaaatagtggaattcaacagattgctggatcaacagttgcatttaatgcactcaaac 386
Query: 301 tcactatctgcctctaatgggtcacataaccctgcagttgcatcactacctgcctctaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tcactatctgcctctaatgggtcacataaccctgcagttgcatcactacctgcctctaat 446
Query: 361 ggatcacatatctctgcggtttcatcactgtccaactctaatgggtcacatatccccaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ggatcacatatctctgcggtttcatcactgtccaactctaatgggtcacatatccccaca 506
Query: 421 attgcatcactacctgcttctaatggttcacaaatccctgcagtttcatcactgcccaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 attgcatcactacctgcttctaatggttcacaaatccctgcagtttcatcactgcccaac 566
Query: 481 tccaatgggtcacatatcactgcagtttcatcactgcccatctctaatggatcacatatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tccaatgggtcacatatcactgcagtttcatcactgcccatctctaatggatcacatatc 626
Query: 541 cccagaattccctcactgctcaactctaatgggtcacatatcactgcagtttcatcactg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 cccagaattccctcactgctcaactctaatgggtcacatatcactgcagtttcatcactg 686
Query: 601 cccaactctaatgggtcacatatccccacaagacatgagaaccccacatgctactctgct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 cccaactctaatgggtcacatatccccacaagacatgagaaccccacatgctactctgct 746
Query: 661 gagcgaccccaaccagatttgatgtc 686
||||||||||||||||||||||||||
Sbjct: 747 gagcgaccccaaccagatttgatgtc 772
>gnl|LJGI|TC73388 similar to UniRef100_Q0E447 Cluster: Os02g0137100 protein; n=2;
Oryza sativa Japonica Group|Rep: Os02g0137100 protein -
Oryza sativa subsp. japonica (Rice), partial (26%)
Length = 770
Score = 1015 bits (512), Expect = 0.0
Identities = 599/628 (95%)
Strand = Plus / Plus
Query: 1 atgccaagcggaccaggcgaaccgggcggaccggtgagacaggtttcctgtcaagatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atgccaagcggaccaggcgaaccgggcggaccggtgagacaggtttcctgtcaagatatt 185
Query: 61 cagctggtgcaaaatctcatagaacgatgtttacaactgtatatgagtcggcaagaagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 cagctggtgcaaaatctcatagaacgatgtttacaactgtatatgagtcggcaagaagtt 245
Query: 121 gtggacaaattagtatgccaagcaaaaatagagcccagtttcactgaactagtttggcaa 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gtggacaaattagtatgtcaagcaaaaatagagcccagtttcactgaactagtttggcaa 305
Query: 181 aagcttgaggaagaaaatgaagaattcttccgagcttattatacaagattgatgttaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 aagcttgaggaagaaaatgaagaattcttccgagcttattatacaagattgatgttaaag 365
Query: 241 cagcaaatagtggaattcaacagattgctggatcaacagttgcatttaatgcactcaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 cagcaaatagtggaattcaacagattgctggatcaacagttgcatttaatgcactcaaac 425
Query: 301 tcactatctgcctctaatgggtcacataaccctgcagttgcatcactacctgcctctaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tcactatctgcctctaatgggtcacataaccctgcagttgcatcactacctgcctctaat 485
Query: 361 ggatcacatatctctgcggtttcatcactgtccaactctaatgggtcacatatccccaca 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 ggattacatatctctgcggtttcatcactgtccaactctaatgggtcacatatccccaca 545
Query: 421 attgcatcactacctgcttctaatggttcacaaatccctgcagtttcatcactgcccaac 480
||| ||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 546 atttcatcactacctgcctctaatgggtcacatatccctgcagtttcatcactgcccaac 605
Query: 481 tccaatgggtcacatatcactgcagtttcatcactgcccatctctaatggatcacatatc 540
|| ||||||||||||||| | || || ||||||| || |||||||| ||||| |||
Sbjct: 606 tctaatgggtcacatatccccacaattgcatcactacctgcttctaatggttcacaaatc 665
Query: 541 cccagaattccctcactgctcaactctaatgggtcacatatcactgcagtttcatcactg 600
|| | || | ||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 666 cctgcagtttcatcactgcccaactccaatgggtcacatatcactgcagtttcatcactg 725
Query: 601 cccaactctaatgggtcacatatcccca 628
|||| ||||||||| |||||||||||||
Sbjct: 726 cccatctctaatggatcacatatcccca 753
Score = 424 bits (214), Expect = e-118
Identities = 241/250 (96%)
Strand = Plus / Plus
Query: 312 ctctaatgggtcacataaccctgcagttgcatcactacctgcctctaatggatcacatat 371
||||||||||||||||| ||| || || |||||||||||||||||||||| ||||||||
Sbjct: 521 ctctaatgggtcacatatccccacaatttcatcactacctgcctctaatgggtcacatat 580
Query: 372 ctctgcggtttcatcactgtccaactctaatgggtcacatatccccacaattgcatcact 431
| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ccctgcagtttcatcactgcccaactctaatgggtcacatatccccacaattgcatcact 640
Query: 432 acctgcttctaatggttcacaaatccctgcagtttcatcactgcccaactccaatgggtc 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 acctgcttctaatggttcacaaatccctgcagtttcatcactgcccaactccaatgggtc 700
Query: 492 acatatcactgcagtttcatcactgcccatctctaatggatcacatatccccagaattcc 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 acatatcactgcagtttcatcactgcccatctctaatggatcacatatccccagaattcc 760
Query: 552 ctcactgctc 561
||||||||||
Sbjct: 761 ctcactgctc 770
Score = 192 bits (97), Expect = 4e-48
Identities = 178/205 (86%)
Strand = Plus / Plus
Query: 427 tcactacctgcttctaatggttcacaaatccctgcagtttcatcactgcccaactccaat 486
|||||| |||| |||||||| ||||| | |||||||||| ||||||| || ||| |||
Sbjct: 426 tcactatctgcctctaatgggtcacataaccctgcagttgcatcactacctgcctctaat 485
Query: 487 gggtcacatatcactgcagtttcatcactgcccatctctaatggatcacatatccccaga 546
|| | ||||||| |||| |||||||||||| ||| ||||||||| ||||||||||||| |
Sbjct: 486 ggattacatatctctgcggtttcatcactgtccaactctaatgggtcacatatccccaca 545
Query: 547 attccctcactgctcaactctaatgggtcacatatcactgcagtttcatcactgcccaac 606
||| | ||||| | ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 546 atttcatcactacctgcctctaatgggtcacatatccctgcagtttcatcactgcccaac 605
Query: 607 tctaatgggtcacatatccccacaa 631
|||||||||||||||||||||||||
Sbjct: 606 tctaatgggtcacatatccccacaa 630
Score = 101 bits (51), Expect = 1e-20
Identities = 105/123 (85%)
Strand = Plus / Plus
Query: 301 tcactatctgcctctaatgggtcacataaccctgcagttgcatcactacctgcctctaat 360
|||||| |||| |||||||| ||||| | |||||||||| ||||||| || ||| |||
Sbjct: 636 tcactacctgcttctaatggttcacaaatccctgcagtttcatcactgcccaactccaat 695
Query: 361 ggatcacatatctctgcggtttcatcactgtccaactctaatgggtcacatatccccaca 420
|| ||||||||| |||| |||||||||||| ||| ||||||||| ||||||||||||| |
Sbjct: 696 gggtcacatatcactgcagtttcatcactgcccatctctaatggatcacatatccccaga 755
Query: 421 att 423
|||
Sbjct: 756 att 758
>gnl|LJGI|FS351566 similar to UniRef100_Q02CH3 Cluster: Methyltransferase type 12; n=1;
Solibacter usitatus Ellin6076|Rep: Methyltransferase
type, partial (3%)
Length = 281
Score = 180 bits (91), Expect = 1e-44
Identities = 97/99 (97%)
Strand = Plus / Minus
Query: 1150 actgataataacttccttgagaaagtagagcaagataacaataggctggactccatatca 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 actgataataacttccttgagaaagtagagcaagataacaataggctggactccatatca 222
Query: 1210 gaaggcctaaggcatgaagactttgggagtgaatagatg 1248
||||||||||| ||||||||||||||||| |||||||||
Sbjct: 221 gaaggcctaagtcatgaagactttgggagggaatagatg 183
>gnl|LJGI|TC70688 similar to UniRef100_Q66GM7 Cluster: At5g04090; n=1; Arabidopsis
thaliana|Rep: At5g04090 - Arabidopsis thaliana (Mouse-ear
cress), partial (42%)
Length = 1125
Score = 95.6 bits (48), Expect = 6e-19
Identities = 84/96 (87%)
Strand = Plus / Plus
Query: 1033 tcttcatttggatttttgggacagattcctagaaattttagcctttcagatctaactgct 1092
|||||||||||| ||||||| |||||| |||||||| | |||||||||||||| ||||||
Sbjct: 706 tcttcatttggagttttggggcagatttctagaaatctcagcctttcagatctgactgct 765
Query: 1093 gatttttctttgagttctgatatactggacagctat 1128
||||||||| ||| ||||| ||| |||| ||||||
Sbjct: 766 gatttttctcagagctctgacataatggagagctat 801
Score = 73.8 bits (37), Expect = 2e-12
Identities = 142/177 (80%)
Strand = Plus / Plus
Query: 34 gtgagacaggtttcctgtcaagatattcagctggtgcaaaatctcatagaacgatgttta 93
||||||| |||||| || ||||||| |||||||||||||||||||||||||||| | |
Sbjct: 97 gtgagacgggtttctcgtgaagatatccagctggtgcaaaatctcatagaacgatatctg 156
Query: 94 caactgtatatgagtcggcaagaagttgtggacaaattagtatgccaagcaaaaatagag 153
||| | || |||| | ||||||||||||| | || || |||| ||||| |||
Sbjct: 157 caattatacatgaacccaaaagaagttgtggaaacgctactagtggaagccaaaatcgag 216
Query: 154 cccagtttcactgaactagtttggcaaaagcttgaggaagaaaatgaagaattcttc 210
|| |||| || ||||| ||||||||||||||||| ||||| ||| |||||||||||
Sbjct: 217 cctggttttacagaacttgtttggcaaaagcttgaagaagagaatcaagaattcttc 273
>gnl|LJGI|TC57979 similar to UniRef100_A7QJJ9 Cluster: Chromosome chr8 scaffold_106,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_106, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (47%)
Length = 1380
Score = 95.6 bits (48), Expect = 6e-19
Identities = 84/96 (87%)
Strand = Plus / Plus
Query: 1033 tcttcatttggatttttgggacagattcctagaaattttagcctttcagatctaactgct 1092
|||||||||||| ||||||| |||||| |||||||| | |||||||||||||| ||||||
Sbjct: 899 tcttcatttggagttttggggcagatttctagaaatctcagcctttcagatctgactgct 958
Query: 1093 gatttttctttgagttctgatatactggacagctat 1128
||||||||| ||| ||||| ||| |||| ||||||
Sbjct: 959 gatttttctcagagctctgacataatggagagctat 994
Score = 73.8 bits (37), Expect = 2e-12
Identities = 142/177 (80%)
Strand = Plus / Plus
Query: 34 gtgagacaggtttcctgtcaagatattcagctggtgcaaaatctcatagaacgatgttta 93
||||||| |||||| || ||||||| |||||||||||||||||||||||||||| | |
Sbjct: 170 gtgagacgggtttctcgtgaagatatccagctggtgcaaaatctcatagaacgatatctg 229
Query: 94 caactgtatatgagtcggcaagaagttgtggacaaattagtatgccaagcaaaaatagag 153
||| | || |||| | ||||||||||||| | || || |||| ||||| |||
Sbjct: 230 caattatacatgaacccaaaagaagttgtggaaacgctactagtggaagccaaaatcgag 289
Query: 154 cccagtttcactgaactagtttggcaaaagcttgaggaagaaaatgaagaattcttc 210
|| |||| || ||||| ||||||||||||||||| ||||| ||| |||||||||||
Sbjct: 290 cctggttttacagaacttgtttggcaaaagcttgaagaagagaatcaagaattcttc 346
Score = 61.9 bits (31), Expect = 9e-09
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 815 caagcatgctttctgctcagaactcaaacttgggtatgatgcaaggaatcaatgggggca 874
||||||||| ||| ||||| | ||||| ||||| |||| ||||| || |||||||| |
Sbjct: 672 caagcatgcgttcagctcaaagctcaagtatgggtttgatacaagggattaatgggggga 731
Query: 875 tgatcaaattagaacctggatattcag 901
||||||||| ||||||||||||||||
Sbjct: 732 tgatcaaatcggaacctggatattcag 758
>gnl|LJGI|GO010714 similar to UniRef100_Q66GM7 Cluster: At5g04090; n=1; Arabidopsis
thaliana|Rep: At5g04090 - Arabidopsis thaliana (Mouse-ear
cress), partial (24%)
Length = 755
Score = 83.8 bits (42), Expect = 2e-15
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 1033 tcttcatttggatttttgggacagattcctagaaattttagcctttcagatctaactgct 1092
|||||||||||| ||||||| |||||| |||||||| | |||||||||||||| ||||||
Sbjct: 688 tcttcatttggagttttggggcagatttctagaaatctcagcctttcagatctgactgct 747
Query: 1093 gatttt 1098
||||||
Sbjct: 748 gatttt 753
Score = 69.9 bits (35), Expect = 4e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 34 gtgagacaggtttcctgtcaagatattcagctggtgcaaaatctcatagaacgat 88
||||||| |||||| || ||||||| ||||||||||||||||||||||||||||
Sbjct: 140 gtgagacgggtttctcgtgaagatatccagctggtgcaaaatctcatagaacgat 194
Score = 61.9 bits (31), Expect = 9e-09
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 815 caagcatgctttctgctcagaactcaaacttgggtatgatgcaaggaatcaatgggggca 874
||||||||| ||| ||||| | ||||| ||||| |||| ||||| || |||||||| |
Sbjct: 462 caagcatgcgttcagctcaaagctcaagtatgggtttgatacaagggattaatgggggga 521
Query: 875 tgatcaaattagaacctggatattcag 901
||||||||| ||||||||||||||||
Sbjct: 522 tgatcaaatcggaacctggatattcag 548
>gnl|LJGI|BW630177 similar to UniRef100_Q66GM7 Cluster: At5g04090; n=1; Arabidopsis
thaliana|Rep: At5g04090 - Arabidopsis thaliana
(Mouse-ear cress), partial (28%)
Length = 489
Score = 73.8 bits (37), Expect = 2e-12
Identities = 142/177 (80%)
Strand = Plus / Plus
Query: 34 gtgagacaggtttcctgtcaagatattcagctggtgcaaaatctcatagaacgatgttta 93
||||||| |||||| || ||||||| |||||||||||||||||||||||||||| | |
Sbjct: 204 gtgagacgggtttctcgtgaagatatccagctggtgcaaaatctcatagaacgatatctg 263
Query: 94 caactgtatatgagtcggcaagaagttgtggacaaattagtatgccaagcaaaaatagag 153
||| | || |||| | ||||||||||||| | || || |||| ||||| |||
Sbjct: 264 caattatacatgaacccaaaagaagttgtggaaacgctactagtggaagccaaaatcgag 323
Query: 154 cccagtttcactgaactagtttggcaaaagcttgaggaagaaaatgaagaattcttc 210
|| |||| || ||||| ||||||||||||||||| ||||| ||| |||||||||||
Sbjct: 324 cctggttttacagaacttgtttggcaaaagcttgaagaagagaatcaagaattcttc 380
>gnl|LJGI|GO016149 similar to UniRef100_Q66GM7 Cluster: At5g04090; n=1; Arabidopsis
thaliana|Rep: At5g04090 - Arabidopsis thaliana
(Mouse-ear cress), partial (17%)
Length = 424
Score = 69.9 bits (35), Expect = 4e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 34 gtgagacaggtttcctgtcaagatattcagctggtgcaaaatctcatagaacgat 88
||||||| |||||| || ||||||| ||||||||||||||||||||||||||||
Sbjct: 385 gtgagacgggtttctcgtgaagatatccagctggtgcaaaatctcatagaacgat 331