Miyakogusa Predicted Gene
- Lj1g3v3858560.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3858560.1 Non Chatacterized Hit- tr|I1MLF1|I1MLF1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57040
PE,97.6,0,Actin-like ATPase domain,NULL; Actin,Actin-like;
ACTIN,Actin-like; ACTIN-RELATED PROTEIN 2, ARP2,NUL,CUFF.31422.1
(1146 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58542 homologue to UniRef100_A7P9Y2 Cluster: Chromoso... 2264 0.0
gnl|LJGI|BP074351 homologue to UniRef100_A7P9Y2 Cluster: Chromos... 236 2e-61
>gnl|LJGI|TC58542 homologue to UniRef100_A7P9Y2 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 1592
Score = 2264 bits (1142), Expect = 0.0
Identities = 1145/1146 (99%)
Strand = Plus / Plus
Query: 1 atggacagcaaaaacgtcgtcgtatgcgacaacggaaccgggtacgtgaagtgtggtttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 atggacagcaaaaacgtcgtcgtatgcgacaacggaaccgggtacgtgaagtgtggtttc 108
Query: 61 gctggtgagaatttccccacctccgttttcccttgtgtggtagggagacccatgctccgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 gctggtgagaatttccccacctccgttttcccttgtgtggtagggagacccatgctccgc 168
Query: 121 tacgaagaatctctcacagaacaagagctaaaggatattgttgttggcgaaggatgcgcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 tacgaagaatctctcacagaacaagagctaaaggatattgttgttggcgaaggatgcgcg 228
Query: 181 gacttgaggcatcagcttgatatatcgtatcccgtgaacaacggcattgtgcaaaactgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gacttgaggcatcagcttgatatatcgtatcccgtgaacaacggcattgtgcaaaactgg 288
Query: 241 gatgatatgtctcatgtgtgggatcatgcattttacaatgagttaaaaattaaccctcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gatgatatgtctcatgtgtgggatcatgcattttacaatgagttaaaaattaaccctcca 348
Query: 301 gactgtaagattctactcacagatccgccgctcaatccatcaaagaatcgtgaaaagatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 gactgtaagattctactcacagatccgccgctcaatccatcaaagaatcgtgaaaagatg 408
Query: 361 gtcgagacaatgtttgagaagtacaattttgctggagtgtttatccaaattcaagctgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gtcgagacaatgtttgagaagtacaattttgctggagtgtttatccaaattcaagctgtt 468
Query: 421 ctaacattatatgctcaaggtttgctgactggactagttatcgactctggtgatggcgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ctaacattatatgctcaaggtttgctgactggactagttatcgactctggtgatggcgtt 528
Query: 481 actcatgtggttccagttgttgatggctattcatttcctcatctaacgaaacgaatgaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 actcatgtggttccagttgttgatggctattcatttcctcatctaacgaaacgaatgaat 588
Query: 541 gtagccggccgacatataacttcctatcttgttgatttgctttcaaggagggggtattct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 gtagccggccgacatataacttcctatcttgttgatttgctttcaaggagggggtattct 648
Query: 601 ctgaatagaactgctgattttgagactgttagggaaatcaaagaaaagctatgctatata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 ctgaatagaactgctgattttgagactgttagggaaatcaaagaaaagctatgctatata 708
Query: 661 agctatgactacaagagggaatatcaattgggacttgagaccaccatccttgttaagaac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 agctatgactacaagagggaatatcaattgggacttgagaccaccatccttgttaagaac 768
Query: 721 tatactcttccagatggaagggtcattaaagtagggactgagaggttccaggcccctgag 780
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 769 tatactcttccagatggaagggtcgttaaagtagggactgagaggttccaggcccctgag 828
Query: 781 gctcttttcacaccggaacttatagatgttgaaggtgatggaatggctgatatggtattt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 gctcttttcacaccggaacttatagatgttgaaggtgatggaatggctgatatggtattt 888
Query: 841 cgctgcattcaggaaatggatattgacaaccggatgatgctttatcaacacatagtttta 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 cgctgcattcaggaaatggatattgacaaccggatgatgctttatcaacacatagtttta 948
Query: 901 agtggagggagcaccatgtatcctggactaccaagccgattggaaaaagaaatacatgat 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949 agtggagggagcaccatgtatcctggactaccaagccgattggaaaaagaaatacatgat 1008
Query: 961 cgttatcttgatgttgttctgaagggaaacagagatggattgaagaaattacgattaaga 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1009 cgttatcttgatgttgttctgaagggaaacagagatggattgaagaaattacgattaaga 1068
Query: 1021 attgaggatccaccacgtaggaaacatatggtgtacctcggaggtgctgtccttgcaggc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1069 attgaggatccaccacgtaggaaacatatggtgtacctcggaggtgctgtccttgcaggc 1128
Query: 1081 ataatgaaggatgcaccagagttctggataaacagggaagattatctagaagaaggagtt 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1129 ataatgaaggatgcaccagagttctggataaacagggaagattatctagaagaaggagtt 1188
Query: 1141 gcttgc 1146
||||||
Sbjct: 1189 gcttgc 1194
>gnl|LJGI|BP074351 homologue to UniRef100_A7P9Y2 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 398
Score = 236 bits (119), Expect = 2e-61
Identities = 168/183 (91%), Gaps = 6/183 (3%)
Strand = Plus / Plus
Query: 644 aaaagctatgctatataagctatgactacaagagggaatatcaattgggacttgagacca 703
||||||||||||| ||||||||||||||| || |||||||||||||||| |||||||
Sbjct: 61 aaaagctatgctagggaagctatgactacaaaagagaatatcaattgggac--gagacca 118
Query: 704 ccatccttgttaagaactatactcttccagatggaagggtcattaaagtagggactgaga 763
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 119 ccatccttgttaagaactatactcttccagatggaagggtcattcaagtagggactgaaa 178
Query: 764 ggttccaggcccctgaggctcttttcacaccggaactt----atagatgttgaaggtgat 819
|||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 179 ggtttcaggctcctgaggctcttttcacaccggaacttatagatagatgttgaaggtgat 238
Query: 820 gga 822
|||
Sbjct: 239 gga 241