Miyakogusa Predicted Gene
- Lj1g3v3244520.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3244520.2 Non Chatacterized Hit- tr|I3SA13|I3SA13_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.51,0,RING/U-box,NULL; ZF_RING_CH,Zinc finger, RING-CH-type; no
description,Zinc finger, RING/FYVE/PHD-typ,CUFF.30255.2
(609 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77101 similar to UniRef100_A7PR45 Cluster: Chromosome... 1183 0.0
gnl|LJGI|TC67464 similar to UniRef100_A7PR45 Cluster: Chromosome... 718 0.0
>gnl|LJGI|TC77101 similar to UniRef100_A7PR45 Cluster: Chromosome chr14 scaffold_26,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_26, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (56%)
Length = 944
Score = 1183 bits (597), Expect = 0.0
Identities = 606/609 (99%)
Strand = Plus / Plus
Query: 1 atggatgagaaaattaagtcatctcctaacacattggtacaatgtcgaatatgccatgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 atggatgagaaaattaagtcatctcctaacacattggtacaatgtcgaatatgccatgat 229
Query: 61 gaagatgaagattcaaacatggaaacaccttgttcttgttgtggcaccttgaagtacgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 gaagatgaagattcaaacatggaaacaccttgttcttgttgtggcaccttgaagtacgca 289
Query: 121 catagaaaatgtgtccaaagatggtgcaatgcgaaaggtgataatacctgtgagatttgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 catagaaaatgtgtccaaagatggtgcaatgcgaaaggtgataatacctgtgagatttgc 349
Query: 181 caacagcaacttaagggctacgttgcacttccaccagctcctttgtttcattttggtggt 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 caacagcaacttaagggctgcgttgcacttccaccagctcctttgtttcattttggtggt 409
Query: 241 tctccaataaattttggagagactactagaatggatcttcataatcatcagtttatagca 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tccccaataaattttggagagactactagaatggatcttcataatcatcagtttatagca 469
Query: 301 atgtttactactaatcatgagttcacagaccctgactttgaatattcagccccctctaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 atgtttactactaatcatgagttcacagaccctgactttgaatattcagccccctctaca 529
Query: 361 aggagcctgatatgctaccgcatcattgccatcatttttcttgttcttcttgttttacgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 aggagcctgatatgctaccgcatcattgccatcatttttcttgttcttcttgttttacgc 589
Query: 421 catacacttccaatcatatttatactcagtggagcagaagggtattcattgacagtgtct 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 590 catacacttccaatcatatttatactcagtggagcagaagggtattcattgacagtgttt 649
Query: 481 acgttaattgtgttgagaatcattggaatgcttgtaccagtgtatataatggttaaagct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 acgttaattgtgttgagaatcattggaatgcttgtaccagtgtatataatggttaaagct 709
Query: 541 attatttcgatccaacggcttcagtttgtgcatgaggatcatcactctcctatgcaatct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 attatttcgatccaacggcttcagtttgtgcatgaggatcatcactctcctatgcaatct 769
Query: 601 catgaggaa 609
|||||||||
Sbjct: 770 catgaggaa 778
>gnl|LJGI|TC67464 similar to UniRef100_A7PR45 Cluster: Chromosome chr14 scaffold_26,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_26, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 614
Score = 718 bits (362), Expect = 0.0
Identities = 365/366 (99%)
Strand = Plus / Plus
Query: 244 ccaataaattttggagagactactagaatggatcttcataatcatcagtttatagcaatg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ccaataaattttggagagactactagaatggatcttcataatcatcagtttatagcaatg 61
Query: 304 tttactactaatcatgagttcacagaccctgactttgaatattcagccccctctacaagg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tttactactaatcatgagttcacagaccctgactttgaatattcagccccctctacaagg 121
Query: 364 agcctgatatgctaccgcatcattgccatcatttttcttgttcttcttgttttacgccat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 agcctgatatgctaccgcatcattgccatcatttttcttgttcttcttgttttacgccat 181
Query: 424 acacttccaatcatatttatactcagtggagcagaagggtattcattgacagtgtctacg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 acacttccaatcatatttatactcagtggagcagaagggtattcattgacagtgtctacg 241
Query: 484 ttaattgtgttgagaatcattggaatgcttgtaccagtgtatataatggttaaagctatt 543
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 242 ttaattgtgttgagaatcattggaatgcttgtaccagtatatataatggttaaagctatt 301
Query: 544 atttcgatccaacggcttcagtttgtgcatgaggatcatcactctcctatgcaatctcat 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 atttcgatccaacggcttcagtttgtgcatgaggatcatcactctcctatgcaatctcat 361
Query: 604 gaggaa 609
||||||
Sbjct: 362 gaggaa 367