Miyakogusa Predicted Gene
- Lj1g3v3116640.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3116640.2 tr|Q1WK58|Q1WK58_LOTJA CYC1 OS=Lotus japonicus
PE=2 SV=1,90.41,0,TCP,Transcription factor, TCP; seg,NULL;
TCP,Transcription factor TCP subgroup; R,CYC/TB1, R
domain,CUFF.30100.2
(993 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|NP7225963 GB|DQ202475.1|ABB36471.1 CYC1;TCP box gene; L... 1846 0.0
gnl|LJGI|TC78109 homologue to UniRef100_Q1WK57 Cluster: CYC2; n=... 180 1e-44
gnl|LJGI|NP7225961 GB|DQ202477.1|ABB36473.1 CYC3;TCP box gene; L... 127 1e-28
>gnl|LJGI|NP7225963 GB|DQ202475.1|ABB36471.1 CYC1;TCP box gene; LjCYC1
Length = 1150
Score = 1846 bits (931), Expect = 0.0
Identities = 948/956 (99%)
Strand = Plus / Plus
Query: 1 atgttccctaattccagttacccttacccttatttcccttcttcctcatcttcttctcct 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 atgttccctaattccagttacccttacccttattttccttcttcctcatcttcttctcct 60
Query: 61 tcaccataccctcctttcaatttcctcaaccctggaaatgcttcaacaaacaacatcttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcaccataccctcctttcaatttcctcaaccctggaaatgcttcaacaaacaacatcttc 120
Query: 121 ctccatgaccctcctcctcttccttctgtcccctacacaaacaacaccaccaacactcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctccatgaccctcctcctcttccttctgtcccctacacaaacaacaccaccaacactcac 180
Query: 181 caccaccatgcccctccaacctgctcagaaaccttcaccaattgggcacttgcagatgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caccaccatgcccctccaacctgctcagaaaccttcaccaattgggcacttgcagatgca 240
Query: 241 atgctcaagcaagaaaacctcactggtgggccccaccatcactacaacctctccaacttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgctcaagcaagaaaacctcactggtgggccccaccatcactacaacctctccaacttc 300
Query: 301 ctcaccagaaaactaccagcagcnnnnnnnccagccaagaaggacaggcacagcaagatt 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 301 ctcaccagaaaactaccagcagcaaaaaaaccagccaagaaggacaggcacagcaagatt 360
Query: 361 cacacctctcagggcttgagggacaggagggtgaggctttcaatcgagatcgcgcgaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cacacctctcagggcttgagggacaggagggtgaggctttcaatcgagatcgcgcgaaag 420
Query: 421 ttcttcgatcttcaagacatgttagggtttgacaaagccagcaataccctcgagtggctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttcttcgatcttcaagacatgttagggtttgacaaagccagcaataccctcgagtggctc 480
Query: 481 ttcagcaaatcaaacaaagcaattgaagagcttttcagaagcaagcatagtgataataac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttcagcaaatcaaacaaagcaattgaagagcttttcagaagcaagcatagtgataataac 540
Query: 541 aatagcactggtgcttgtgctgctgatggtgatggtgatggtgatgatgacagcttctcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aatagcactggtgcttgtgctgctgatggtgatggtgatggtgatgatgacagcttctcc 600
Query: 601 tcttcctcttcagaagatgaagttgtttctgtgaaaagggcacagaaagaaaaagaacct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcttcctcttcagaagatgaagttgtttctgtgaaaagggcacagaaagaaaaagaacct 660
Query: 661 tctggtgttcaagcaaagatgaaggaatcaagggaaaaagcaagggcaagagcaagggaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tctggtgttcaagcaaagatgaaggaatcaagggaaaaagcaagggcaagagcaagggaa 720
Query: 721 aggactagtaacaagatgtgccctgaaactgaaaatcctcaaatgcagcttcaccaattc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aggactagtaacaagatgtgccctgaaactgaaaatcctcaaatgcagcttcaccaattc 780
Query: 781 agttcagagtttcagcctcatcaggaactgcatagagatgatgatttcaaggtttttgag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 agttcagagtttcagcctcatcaggaactgcatagagatgatgatttcaaggtttttgag 840
Query: 841 gaatccattgtgatcaagaggaagttgaagcaatcattgatgtcttcttctcatcatcac 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gaatccattgtgatcaagaggaagttgaagcaatcattgatgtcttcttctcatcatcac 900
Query: 901 cagaaccaaaacattgggatccctaaggaagcaagtttcaacaacaacaacaatag 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 cagaaccaaaacattgggatccctaaggaagcaagtttcaacaacaacaacaatag 956
Score = 75.8 bits (38), Expect = 5e-13
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 956 ggcttcaaatctttggaaaatcttgggaggagtgcacc 993
||||||||||||||||||||||||||||||||||||||
Sbjct: 1058 ggcttcaaatctttggaaaatcttgggaggagtgcacc 1095
>gnl|LJGI|TC78109 homologue to UniRef100_Q1WK57 Cluster: CYC2; n=1; Lotus
japonicus|Rep: CYC2 - Lotus japonicus, complete
Length = 1544
Score = 180 bits (91), Expect = 1e-44
Identities = 140/155 (90%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 331 ccagccaagaaggacaggcacagcaagattcacacctctcagggcttgagggacaggagg 390
||||| ||||| ||| |||||||||||||| ||||||||||||| |||||||| |||||
Sbjct: 310 ccagctaagaaagaccggcacagcaagatttacacctctcaggggctgagggaccggagg 369
Query: 391 gtgaggctttcaatcgagatcgcgcgaaagttcttcgatcttcaagacatgttagggt-t 449
|||||||| |||||||||||||| |||||||||| ||||||||||||||| |||||| |
Sbjct: 370 gtgaggctctcaatcgagatcgcaagaaagttctttgatcttcaagacatgctagggtat 429
Query: 450 tgacaaagccagcaataccctcgagtggctcttca 484
||| ||||||||||| |||||||||||||||||||
Sbjct: 430 tgataaagccagcaacaccctcgagtggctcttca 464
Score = 97.6 bits (49), Expect = 1e-19
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 673 gcaaagatgaaggaatcaagggaaaaagcaagggcaagagcaagggaaaggactagtaac 732
|||||||| |||||||||||||| |||||||| |||||||||||||||||||| ||||||
Sbjct: 715 gcaaagataaaggaatcaagggagaaagcaagagcaagagcaagggaaaggacaagtaac 774
Query: 733 aagat 737
|||||
Sbjct: 775 aagat 779
Score = 79.8 bits (40), Expect = 3e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 820 gatgatttcaaggtttttgaggaatccattgtgatcaagaggaagttgaagcaatcattg 879
||||| ||||| ||| ||||||||||||||||||||||||| || ||||||| || |||
Sbjct: 934 gatgacttcaacgttattgaggaatccattgtgatcaagagaaaattgaagccatggttg 993
Query: 880 atgtcttcttct 891
||||||||||||
Sbjct: 994 atgtcttcttct 1005
Score = 58.0 bits (29), Expect = 1e-07
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 956 ggcttcaaatctttggaaaatcttgggaggagtgcac 992
|||| |||||||||||||| |||||||||||||||||
Sbjct: 1193 ggctccaaatctttggaaagtcttgggaggagtgcac 1229
>gnl|LJGI|NP7225961 GB|DQ202477.1|ABB36473.1 CYC3;TCP box gene; LjCYC3
Length = 1113
Score = 127 bits (64), Expect = 1e-28
Identities = 127/148 (85%)
Strand = Plus / Plus
Query: 337 aagaaggacaggcacagcaagattcacacctctcagggcttgagggacaggagggtgagg 396
||||| ||||||||||||||||||||||| |||||||| || |||||| | ||||||||
Sbjct: 340 aagaaagacaggcacagcaagattcacacatctcaggggttaagggaccgccgggtgagg 399
Query: 397 ctttcaatcgagatcgcgcgaaagttcttcgatcttcaagacatgttagggtttgacaaa 456
|| || | |||||| ||||||||||||||||||||||| |||||| | | |||||||||
Sbjct: 400 ctatcgagcgagatagcgcgaaagttcttcgatcttcaggacatgctggagtttgacaag 459
Query: 457 gccagcaataccctcgagtggctcttca 484
| ||||| || || |||||||||||||
Sbjct: 460 ccaagcaacacacttgagtggctcttca 487