Miyakogusa Predicted Gene
- Lj1g3v3022360.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3022360.1 Non Chatacterized Hit- tr|B9RW35|B9RW35_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,32.22,4e-19,LEA_2,Late embryogenesis abundant protein, LEA-14;
FAMILY NOT NAMED,NULL; seg,NULL,CUFF.29987.1
(655 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68273 weakly similar to UniRef100_A7PG45 Cluster: Chr... 1138 0.0
gnl|LJGI|FS338493 weakly similar to UniRef100_A7PG45 Cluster: Ch... 58 7e-08
gnl|LJGI|AV418706 weakly similar to UniRef100_A2Q440 Cluster: Ha... 52 4e-06
>gnl|LJGI|TC68273 weakly similar to UniRef100_A7PG45 Cluster: Chromosome chr6
scaffold_15, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_15, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (80%)
Length = 1061
Score = 1138 bits (574), Expect = 0.0
Identities = 574/574 (100%)
Strand = Plus / Plus
Query: 82 tgctggctcatcggcctcctcttcatcttcctcatcctcctcggcatcgccgccggcgtc 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tgctggctcatcggcctcctcttcatcttcctcatcctcctcggcatcgccgccggcgtc 365
Query: 142 ttctacctcgttttccgtcccaaagcgcctaactactcaatccaaaccgtctccgtcaaa 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ttctacctcgttttccgtcccaaagcgcctaactactcaatccaaaccgtctccgtcaaa 425
Query: 202 ggaatgaacctcacctcgccatcgccgtcatccgcggcggcaatctcgccggagttcgac 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ggaatgaacctcacctcgccatcgccgtcatccgcggcggcaatctcgccggagttcgac 485
Query: 262 gtcgcggtgagagccaacaacggcaacgacaagatcgggatctactatttgaaaggaagc 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gtcgcggtgagagccaacaacggcaacgacaagatcgggatctactatttgaaaggaagc 545
Query: 322 tcggtggaaatgttctatagagactcgcggctctgcggcggcgcgttgccggcgttttac 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tcggtggaaatgttctatagagactcgcggctctgcggcggcgcgttgccggcgttttac 605
Query: 382 caggcgtcgaacaatgtgacggtgtttaaggcggtgttgaagggcgacggcgtcgaactc 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 caggcgtcgaacaatgtgacggtgtttaaggcggtgttgaagggcgacggcgtcgaactc 665
Query: 442 gccgggtcggatcggacggcgttggtgaacgcggtggcgaaacggagcgtgccgttgacg 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 gccgggtcggatcggacggcgttggtgaacgcggtggcgaaacggagcgtgccgttgacg 725
Query: 502 atgaagctgagagcgccggtgaagattaaagtggggtccgttaagacgtggaagattacc 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 atgaagctgagagcgccggtgaagattaaagtggggtccgttaagacgtggaagattacc 785
Query: 562 gttaaggtggattgtgacgtggcggtggatcagttaacggcgaagtcgaagattgttcat 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 gttaaggtggattgtgacgtggcggtggatcagttaacggcgaagtcgaagattgttcat 845
Query: 622 aaggattgtagttatggattggatttttggtgat 655
||||||||||||||||||||||||||||||||||
Sbjct: 846 aaggattgtagttatggattggatttttggtgat 879
Score = 67.9 bits (34), Expect = 7e-11
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 1 atgcggcttttgctgctgcctctgctggctcctcggnnnnnnnttcatcttcctcctcct 60
||||||||| ||||||||||||||||||||| |||| |||||||||||| ||||
Sbjct: 284 atgcggcttctgctgctgcctctgctggctcatcggcctcctcttcatcttcctcatcct 343
Query: 61 cctcggc 67
|||||||
Sbjct: 344 cctcggc 350
>gnl|LJGI|FS338493 weakly similar to UniRef100_A7PG45 Cluster: Chromosome chr6
scaffold_15, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_15, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (65%)
Length = 769
Score = 58.0 bits (29), Expect = 7e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 235 gcggcggcaatctcgccggagttcgacgtcgcggtgagagccaacaacggcaacgacaag 294
||||||||||| |||||||||||||||||| | || | ||| ||||| |||||||||
Sbjct: 482 gcggcggcaatgtcgccggagttcgacgtcactgtcaaagcggacaaccctaacgacaag 541
Query: 295 atcgggatc 303
|||||||||
Sbjct: 542 atcgggatc 550
>gnl|LJGI|AV418706 weakly similar to UniRef100_A2Q440 Cluster: Harpin-induced 1; n=1;
Medicago truncatula|Rep: Harpin-induced 1 - Medicago
truncatula (Barrel medic), partial (21%)
Length = 374
Score = 52.0 bits (26), Expect = 4e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 82 tgctggctcatcggcctcctcttcatcttcctcatcctcctcggcatcgccgccggcgtc 141
|||||||||||| | ||||||||||| || |||||||||||||| ||||| || ||||
Sbjct: 174 tgctggctcatcctcatcctcttcatcctcatcatcctcctcggcgccgccggcgccgtc 233
Query: 142 ttctac 147
|||||
Sbjct: 234 ctctac 239