Miyakogusa Predicted Gene

Lj1g3v3022320.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3022320.1 Non Chatacterized Hit- tr|I1N4J8|I1N4J8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20382 PE,81.42,0,RRM,RNA
recognition motif domain; no description,Nucleotide-binding,
alpha-beta plait; RNA recogniti,CUFF.29891.1
         (339 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW614023 similar to UniRef100_A7PDA4 Cluster: Chromosom...   672   0.0  

>gnl|LJGI|BW614023 similar to UniRef100_A7PDA4 Cluster: Chromosome chr17 scaffold_12,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_12, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (40%)
          Length = 485

 Score =  672 bits (339), Expect = 0.0
 Identities = 339/339 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcgtttatcggtaaaataggaaagctactcaagaattctgctgtcaagcacatcagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83  atggcgtttatcggtaaaataggaaagctactcaagaattctgctgtcaagcacatcagt 142

                                                                       
Query: 61  caggatgtttctgtgtctactccttcgatgtttcaagcaatcagatccatgtcatctgcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 caggatgtttctgtgtctactccttcgatgtttcaagcaatcagatccatgtcatctgcc 202

                                                                       
Query: 121 aaggtttttgttggaggtatttcatacagcactgatgatacaagtctgcgagaagctttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 aaggtttttgttggaggtatttcatacagcactgatgatacaagtctgcgagaagctttt 262

                                                                       
Query: 181 tctcgttatggagaagttattgaagcaaagattatcgtcgaccatgattcgcaaaggtcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tctcgttatggagaagttattgaagcaaagattatcgtcgaccatgattcgcaaaggtcc 322

                                                                       
Query: 241 agaggttttggctttgtaacatatgcaaccagtgaggatgcatcttctgccattcaggcc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 agaggttttggctttgtaacatatgcaaccagtgaggatgcatcttctgccattcaggcc 382

                                                  
Query: 301 ctcgatggccaggatcttcatggtcggagaatacgggta 339
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ctcgatggccaggatcttcatggtcggagaatacgggta 421