Miyakogusa Predicted Gene
- Lj1g3v2611340.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2611340.1 Non Chatacterized Hit- tr|I1L6R2|I1L6R2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51052 PE,83.45,0,no
description,Homeodomain-like; coiled-coil,NULL; seg,NULL;
HOMEOBOX_1,Homeobox, conserved site; Ho,CUFF.29262.1
(2433 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS341512 similar to UniRef100_A7PXZ1 Cluster: Chromosom... 1259 0.0
gnl|LJGI|TC71926 homologue to UniRef100_A7PXZ1 Cluster: Chromoso... 137 4e-31
gnl|LJGI|BP084337 113 5e-24
gnl|LJGI|BP057208 homologue to UniRef100_A7PXZ1 Cluster: Chromos... 64 4e-09
gnl|LJGI|AV407274 similar to UniRef100_A7PXZ1 Cluster: Chromosom... 60 7e-08
gnl|LJGI|TC75175 homologue to UniRef100_A7PXH2 Cluster: Chromoso... 56 1e-06
>gnl|LJGI|FS341512 similar to UniRef100_A7PXZ1 Cluster: Chromosome chr15 scaffold_37,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_37, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 808
Score = 1259 bits (635), Expect = 0.0
Identities = 635/635 (100%)
Strand = Plus / Plus
Query: 1 atgagttttggaggtgtttttgagaacaagcaaggtggtgaaggtgctaagattgttgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 atgagttttggaggtgtttttgagaacaagcaaggtggtgaaggtgctaagattgttgca 233
Query: 61 gatattgcttataaccaagataaaatgccctctggtgcaatctcacagcctcgcttagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 gatattgcttataaccaagataaaatgccctctggtgcaatctcacagcctcgcttagcc 293
Query: 121 acacccactttggctaaatccatgctcaactcttctagcctatctctagcccttcaaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 acacccactttggctaaatccatgctcaactcttctagcctatctctagcccttcaaaca 353
Query: 181 aatattgatgggcaaggaaatgggcatgggaatggattgatacatgagaattatgaagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 aatattgatgggcaaggaaatgggcatgggaatggattgatacatgagaattatgaagga 413
Query: 241 catggattgagaagaagcagagaagaagagcatgaaagcagatctgggagtgataacatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 catggattgagaagaagcagagaagaagagcatgaaagcagatctgggagtgataacatg 473
Query: 301 gatgctgcttctggtgatgattttgatgctgccgacaatcgtccaagaaaaaagcgttat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 gatgctgcttctggtgatgattttgatgctgccgacaatcgtccaagaaaaaagcgttat 533
Query: 361 caccgacacactcctcagcaaatacaagaacttgaatcgctgttcaaggagtgtcctcac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 caccgacacactcctcagcaaatacaagaacttgaatcgctgttcaaggagtgtcctcac 593
Query: 421 ccggatgagaagcaaaggcttgaactcagcaaaaggctttgtttggaaaccaggcaggtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 ccggatgagaagcaaaggcttgaactcagcaaaaggctttgtttggaaaccaggcaggtc 653
Query: 481 aagttttggtttcaaaatcgaagaacccaaatgaagactcaattggaacgccatgagaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 aagttttggtttcaaaatcgaagaacccaaatgaagactcaattggaacgccatgagaat 713
Query: 541 tccttgctcaggcaagagaatgataagctgagagcagagaacatgtctattagagaagca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 tccttgctcaggcaagagaatgataagctgagagcagagaacatgtctattagagaagca 773
Query: 601 atgaggaatccaatgtgctcaaattgtggtggtcc 635
|||||||||||||||||||||||||||||||||||
Sbjct: 774 atgaggaatccaatgtgctcaaattgtggtggtcc 808
>gnl|LJGI|TC71926 homologue to UniRef100_A7PXZ1 Cluster: Chromosome chr15
scaffold_37, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr15 scaffold_37, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (11%)
Length = 737
Score = 137 bits (69), Expect = 4e-31
Identities = 161/188 (85%), Gaps = 9/188 (4%)
Strand = Plus / Plus
Query: 256 agcagagaagaagagcatgaaagcagatctgggagtgataacatggatgctg---cttct 312
||||| ||||||||||| |||||||||||| |||||||||||||||| || ||||
Sbjct: 549 agcagggaagaagagca---aagcagatctggcagtgataacatggatggtggtgcttcc 605
Query: 313 ggtgatgattttgatgctgccgacaatcgtcc-aagaaaaa--agcgttatcaccgacac 369
||||||| |||||||||||||||| ||| || || || |||||||||||||||||
Sbjct: 606 tgtgatgaacaagatgctgccgacaatcctcctaataagaagaagcgttatcaccgacac 665
Query: 370 actcctcagcaaatacaagaacttgaatcgctgttcaaggagtgtcctcacccggatgag 429
||||||||||| || ||||| |||||| || |||||||||||||||||||||| ||||||
Sbjct: 666 actcctcagcagattcaagagcttgaagcgttgttcaaggagtgtcctcacccagatgag 725
Query: 430 aagcaaag 437
||||||||
Sbjct: 726 aagcaaag 733
>gnl|LJGI|BP084337
Length = 511
Score = 113 bits (57), Expect = 5e-24
Identities = 57/57 (100%)
Strand = Plus / Minus
Query: 2377 aacctcatcttgtgcaccgttcaaaagataaaagcagctcttaacggcgaaagctga 2433
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 aacctcatcttgtgcaccgttcaaaagataaaagcagctcttaacggcgaaagctga 455
>gnl|LJGI|BP057208 homologue to UniRef100_A7PXZ1 Cluster: Chromosome chr15 scaffold_37,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_37, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 509
Score = 63.9 bits (32), Expect = 4e-09
Identities = 77/92 (83%)
Strand = Plus / Minus
Query: 2314 cagatccttgtgaacagcctccccactgcaaagctcacggtggagtctgtggagacggtg 2373
||||| || ||||| || ||||| || || ||||| ||||||||||| |||||||| |||
Sbjct: 507 cagatactcgtgaatagtctccctacggccaagctgacggtggagtcagtggagaccgtg 448
Query: 2374 aacaacctcatcttgtgcaccgttcaaaagat 2405
||||| ||||||| ||||| ||||| |||||
Sbjct: 447 aacaatctcatctcctgcacggttcagaagat 416
>gnl|LJGI|AV407274 similar to UniRef100_A7PXZ1 Cluster: Chromosome chr15 scaffold_37,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_37, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 270
Score = 60.0 bits (30), Expect = 7e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 1969 agcgagtgggacatactctccaatggtggaccaatgcaggagatgg 2014
|||||||||||||| | |||||||| |||||||||||||||||||
Sbjct: 215 agcgagtgggacatcttgtccaatgggggaccaatgcaggagatgg 260
>gnl|LJGI|TC75175 homologue to UniRef100_A7PXH2 Cluster: Chromosome chr12
scaffold_36, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_36, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 831
Score = 56.0 bits (28), Expect = 1e-06
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 403 ttcaaggagtgtcctcacccggatgagaagcaaagg 438
|||||||||||||||||||| ||||| |||||||||
Sbjct: 505 ttcaaggagtgtcctcacccagatgacaagcaaagg 540