Miyakogusa Predicted Gene

Lj1g3v2523750.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2523750.1 Non Chatacterized Hit- tr|I1HRK5|I1HRK5_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,63.49,1e-18,Ovate,Ovate  protein family, C-terminal;
DNA_binding_2,DNA-binding domain, ovate family-like;
A_thal,CUFF.29089.1
         (1149 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76577 similar to UniRef100_A7QFM0 Cluster: Chromosome...   196   2e-49
gnl|LJGI|TC77863 similar to UniRef100_A7NY20 Cluster: Chromosome...    92   9e-18
gnl|LJGI|BP048280 similar to UniRef100_A7NY20 Cluster: Chromosom...    72   8e-12
gnl|LJGI|TC67036 similar to UniRef100_A7NY20 Cluster: Chromosome...    64   2e-09

>gnl|LJGI|TC76577 similar to UniRef100_A7QFM0 Cluster: Chromosome chr8 scaffold_88,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr8 scaffold_88, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (18%)
          Length = 455

 Score =  196 bits (99), Expect = 2e-49
 Identities = 159/179 (88%)
 Strand = Plus / Plus

                                                                        
Query: 958  gtgaagtcgtcgtttgatccgcagagggatttcagagaatcaatggtggagatgattgag 1017
            ||||||||||||||  | ||||||| ||||||||| || ||||||||||||||||| | |
Sbjct: 80   gtgaagtcgtcgttcaacccgcagaaggatttcagggagtcaatggtggagatgatcgtg 139

                                                                        
Query: 1018 cagaacaacatcagggattcaaaggatttggaggatcttctagcttgttacctttctctg 1077
            ||||||||||||||||  || ||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 140  cagaacaacatcagggcgtcgaaggacttggaagatcttcttgcttgttacctttctctg 199

                                                                       
Query: 1078 aactcagatgagtatcatgatctcattatcaaagtgttcaagcaaatttggtttgattt 1136
            || |||||  |||||||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct: 200  aattcagaccagtatcatgaactcatcatcaaggtgttcaagcaaatttggtttgattt 258


>gnl|LJGI|TC77863 similar to UniRef100_A7NY20 Cluster: Chromosome chr6 scaffold_3,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr6 scaffold_3, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (34%)
          Length = 1189

 Score = 91.7 bits (46), Expect = 9e-18
 Identities = 85/98 (86%)
 Strand = Plus / Plus

                                                                        
Query: 956  ttgtgaagtcgtcgtttgatccgcagagggatttcagagaatcaatggtggagatgattg 1015
            |||| ||||| || |||||||| ||||| |||||||| || |||||||||||||||||||
Sbjct: 928  ttgttaagtcctcatttgatccacagagtgatttcagggattcaatggtggagatgattg 987

                                                  
Query: 1016 agcagaacaacatcagggattcaaaggatttggaggat 1053
             | ||||||| ||| |||| ||||| ||||||||||||
Sbjct: 988  tggagaacaagatccgggaatcaaaagatttggaggat 1025



 Score = 58.0 bits (29), Expect = 1e-07
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 12  caggttcagattatcagatatgatgcccaatgcttggttttacaa 56
           |||||||| ||| ||||||||||| || |||||||||||||||||
Sbjct: 92  caggttcaaattttcagatatgataccaaatgcttggttttacaa 136


>gnl|LJGI|BP048280 similar to UniRef100_A7NY20 Cluster: Chromosome chr6 scaffold_3,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr6 scaffold_3, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (23%)
          Length = 523

 Score = 71.9 bits (36), Expect = 8e-12
 Identities = 126/156 (80%)
 Strand = Plus / Minus

                                                                        
Query: 956  ttgtgaagtcgtcgtttgatccgcagagggatttcagagaatcaatggtggagatgattg 1015
            |||| ||||| || |||||||| || || || ||||  ||||||||||||||||||||| 
Sbjct: 278  ttgttaagtcctcatttgatccacaaagagacttcaaggaatcaatggtggagatgatta 219

                                                                        
Query: 1016 agcagaacaacatcagggattcaaaggatttggaggatcttctagcttgttacctttctc 1075
             | ||||||| |||||||| ||||| ||| ||||| | || || || || || ||||| |
Sbjct: 218  tggagaacaatatcagggaatcaaaagatctggagaacctgctggcatgctatctttcac 159

                                                
Query: 1076 tgaactcagatgagtatcatgatctcattatcaaag 1111
            |||| |||| ||| || ||||| |||||| ||||||
Sbjct: 158  tgaattcaggtgaataccatgagctcattgtcaaag 123


>gnl|LJGI|TC67036 similar to UniRef100_A7NY20 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (9%)
          Length = 616

 Score = 63.9 bits (32), Expect = 2e-09
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggcaattgcaggttcagattatcagatatgatgcccaatgcttggttttacaagctc 60
           ||||| |||| ||||||||  |||||||| ||||| |||||||| |||||||||||||| 
Sbjct: 140 atggggaattacaggttcaagttatcagacatgattcccaatgcctggttttacaagctg 199

                           
Query: 61  agggacatgggaagag 76
           |  |||||||| ||||
Sbjct: 200 aaagacatggggagag 215



 Score = 52.0 bits (26), Expect = 8e-06
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 283 cctgaatcacccagaaaatcatccaaacaaaggaccaagagaagaa 328
           |||||| |||||||||||||||||||||| || ||||  |||||||
Sbjct: 395 cctgaaccacccagaaaatcatccaaacagagaaccagaagaagaa 440