Miyakogusa Predicted Gene

Lj1g3v2448110.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2448110.2 tr|F2EJ57|F2EJ57_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,50.49,2e-16,coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY
NOT NAMED,NULL; seg,NULL; DUF827,Protein of unkno,CUFF.29035.2
         (624 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO013039 similar to UniRef100_A7QFK9 Cluster: Chromosom...    76   3e-13

>gnl|LJGI|GO013039 similar to UniRef100_A7QFK9 Cluster: Chromosome chr8 scaffold_88,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_88, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (29%)
          Length = 761

 Score = 75.8 bits (38), Expect = 3e-13
 Identities = 95/114 (83%)
 Strand = Plus / Plus

                                                                       
Query: 511 gctccaggcttaatactaatggaattgaatcaggccaagttgaatctaaccaaaactact 570
           ||||| ||||||||  |||||||||||||  |||| || |||||||| | || |||||| 
Sbjct: 93  gctccgggcttaatcttaatggaattgaagaaggcaaaattgaatctgaacagaactaca 152

                                                                 
Query: 571 aatgatcttgctgacgtacgagctgctgttgaatcactcaataagaagttagag 624
           |||||| ||||||| || |||||| |||| ||||||||||| || ||| |||||
Sbjct: 153 aatgatattgctgaggttcgagcttctgtcgaatcactcaacaacaagctagag 206