Miyakogusa Predicted Gene
- Lj1g3v2141160.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2141160.1 tr|G7J4P1|G7J4P1_MEDTR Receptor-like protein
kinase OS=Medicago truncatula GN=MTR_3g113140 PE=4
SV=1,76.48,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
LEURICHRPT,NULL; Protein kinase-like (PK-like),Prot,CUFF.28790.1
(3424 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS360095 similar to UniRef100_A7NT13 Cluster: Chromosom... 1566 0.0
gnl|LJGI|CB826711 weakly similar to UniRef100_A7NT13 Cluster: Ch... 880 0.0
gnl|LJGI|TC77006 similar to UniRef100_A7QE13 Cluster: Chromosome... 163 9e-39
>gnl|LJGI|FS360095 similar to UniRef100_A7NT13 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 794
Score = 1566 bits (790), Expect = 0.0
Identities = 793/794 (99%)
Strand = Plus / Minus
Query: 2515 acaagaaacttcgatgaggagaatgtgctaagcagaggaaaacatggcctggttttcaaa 2574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 acaagaaacttcgatgaggagaatgtgctaagcagaggaaaacatggcctggttttcaaa 735
Query: 2575 gcaaccttcaacgacggcattgttctctccattcgccgcctccctgataattccctcatg 2634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 gcaaccttcaacgacggcattgttctctccattcgccgcctccctgataattccctcatg 675
Query: 2635 gaagaacccactttccgcagagaagcagagtcactaggaaaagtgaagcaccgaaactta 2694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 gaagaacccactttccgcagagaagcagagtcactaggaaaagtgaagcaccgaaactta 615
Query: 2695 acagttcttcgtggttactatgcaggaccaccctctgatatgcgtcttctggtgtatgac 2754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 acagttcttcgtggttactatgcaggaccaccctctgatatgcgtcttctggtgtatgac 555
Query: 2755 tacatgccgaatggaaacctcggaacgcttctgcaggaagcttcacagcaagatggccat 2814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tacatgccgaatggaaacctcggaacgcttctgcaggaagcttcacagcaagatggccat 495
Query: 2815 gtcctgaactggccaatgcggcatctcattgcgctaggaatcgcacgagggctttcgttt 2874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 gtcctgaactggccaatgcggcatctcattgcgctaggaatcgcacgagggctttcgttt 435
Query: 2875 ctgcactctgttccgatcgttcatggcgacgtgaagcctcagaatgttctcttcgacgca 2934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ctgcactctgttccgatcgttcatggcgacgtgaagcctcagaatgttctcttcgacgca 375
Query: 2935 gatttcgaagcccatttgtctgagttcgggttagaccgggtgacttcgccggcggtgaac 2994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gatttcgaagcccatttgtctgagttcgggttagaccgggtgacttcgccggcggtgaac 315
Query: 2995 acggcggaggagtcgtcttcgacgactccagttggatcattaggctacgcggcgccggaa 3054
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 314 acggcggaggagtcgtcttcgacgactccggttggatcattaggctacgcggcgccggaa 255
Query: 3055 gctgcgttaacagggcaggcgacgaaggagggtgacgtgtacagcttcgggatcgtgttg 3114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gctgcgttaacagggcaggcgacgaaggagggtgacgtgtacagcttcgggatcgtgttg 195
Query: 3115 ttggagattctgacggggaggaaggcggtgatgtttacgcatgatgaggacattgtgaag 3174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ttggagattctgacggggaggaaggcggtgatgtttacgcatgatgaggacattgtgaag 135
Query: 3175 tgggtgaagaagcagttgcagagagggcagatatcggagctgttggaaccggggttgctt 3234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 tgggtgaagaagcagttgcagagagggcagatatcggagctgttggaaccggggttgctt 75
Query: 3235 gagctggatccagagtcgtcggagtgggaggagtttttgctggggattaaggtggcgctg 3294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 gagctggatccagagtcgtcggagtgggaggagtttttgctggggattaaggtggcgctg 15
Query: 3295 ctgtgtacggcgcc 3308
||||||||||||||
Sbjct: 14 ctgtgtacggcgcc 1
>gnl|LJGI|CB826711 weakly similar to UniRef100_A7NT13 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (13%)
Length = 444
Score = 880 bits (444), Expect = 0.0
Identities = 444/444 (100%)
Strand = Plus / Plus
Query: 1947 cccagatgaaatctcaaaatgttcagctttgagtacactcattttggatgctaatcactt 2006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cccagatgaaatctcaaaatgttcagctttgagtacactcattttggatgctaatcactt 60
Query: 2007 cacaggccacataccagaatccttgtcaaagttatcaaacttgacagtgctaagcctctc 2066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cacaggccacataccagaatccttgtcaaagttatcaaacttgacagtgctaagcctctc 120
Query: 2067 ttcaaattcactcacaggagaaattccgggtggcttttcattcaattttggtttgaagca 2126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttcaaattcactcacaggagaaattccgggtggcttttcattcaattttggtttgaagca 180
Query: 2127 tttgaatttctccaacaataatctagaaggtgaaattccagaaatgcttggttctagaat 2186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttgaatttctccaacaataatctagaaggtgaaattccagaaatgcttggttctagaat 240
Query: 2187 caacgaccctttactgtttgcaatgaaccagaggctatgcggaaagcctctacataaaga 2246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caacgaccctttactgtttgcaatgaaccagaggctatgcggaaagcctctacataaaga 300
Query: 2247 atgtgcaaacgtgagaaggagaaagaggagaaggataataatcttcaccgccgtggcggt 2306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atgtgcaaacgtgagaaggagaaagaggagaaggataataatcttcaccgccgtggcggt 360
Query: 2307 ggccggtttactcctcttagcactatgttgctgtggctacatttacagcctcatacggtg 2366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggccggtttactcctcttagcactatgttgctgtggctacatttacagcctcatacggtg 420
Query: 2367 gcgaaacaagctccggcgaggcgt 2390
||||||||||||||||||||||||
Sbjct: 421 gcgaaacaagctccggcgaggcgt 444
>gnl|LJGI|TC77006 similar to UniRef100_A7QE13 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 960
Score = 163 bits (82), Expect = 9e-39
Identities = 226/272 (83%), Gaps = 9/272 (3%)
Strand = Plus / Plus
Query: 1715 cctttgttggaagcattccagcaacatatgggtttctgagttccttaactgttctctctt 1774
|||||||||| | |||||||||||| | |||| ||| ||||| |||| |||||||||||
Sbjct: 187 cctttgttggtaacattccagcaaccaaggggtctctcagttc-ttaattgttctctctt 245
Query: 1775 tgtcacacaatagcatttctggttcaatccctccagagattggtggttgttcacagcttg 1834
||||||||||||||||||||||| |||||||| |||| ||||||||||||||||| |||
Sbjct: 246 tgtcacacaatagcatttctggtgcaatcccttcagatattggtggttgttcacatgttg 305
Query: 1835 aagttcttcagctgaactcaaatcacttggaagctaacattcctgt------tgaaatct 1888
|||| ||||| ||| |||| || ||| |||||||||||| || ||||||||
Sbjct: 306 aagtacttcacctgctctcagattggttgcaagctaacattctggttcggggtgaaatct 365
Query: 1889 ctcagctttccaaatt--gaaagagcttaacttgggacacaataggttaaatggtgaaat 1946
| || ||||| || |||||||||||||||||| ||| || ||||||| |||| ||
Sbjct: 366 cacacctttcttggttaaaaaagagcttaacttgggaaacagtatgttaaatagtgatat 425
Query: 1947 cccagatgaaatctcaaaatgttcagctttga 1978
|||||||||||||||||||||||| |||||||
Sbjct: 426 cccagatgaaatctcaaaatgttctgctttga 457
Score = 137 bits (69), Expect = 5e-31
Identities = 193/235 (82%), Gaps = 7/235 (2%)
Strand = Plus / Plus
Query: 2059 agcctctcttcaaattcactcacaggagaaattccgggtggcttttcattcaattttggt 2118
|||||||||||||||||| | ||| || |||||| |||||| |||||||||| || ||||
Sbjct: 508 agcctctcttcaaattcattgacaagaaaaattctgggtggtttttcattcatttctggt 567
Query: 2119 ttgaagcatttgaatttctccaacaataatctagaaggtgaaattccagaaatgcttggt 2178
|||||| |||||||||| ||| || ||||||| || ||||| ||||| |||||||| ||
Sbjct: 568 ttgaagtatttgaatttatcccaccataatcttgagggtgagattcccgaaatgctccgt 627
Query: 2179 tctagaatcaacgaccctttactgtttgcaatgaaccagaggctatgcggaaagcctcta 2238
|||||| | |||| ||||||| ||| | ||||||||||||| |||||| |
Sbjct: 628 tctagatt-------ccttccgtgtttgccatggatgagaggctatgcgggaagcctttg 680
Query: 2239 cataaagaatgtgcaaacgtgagaaggagaaagaggagaaggataataatcttca 2293
|||| |||||||| ||| |||||||| |||||||||||||||||||| ||||||
Sbjct: 681 catatagaatgtgaaaatatgagaaggcgaaagaggagaaggataatagtcttca 735