Miyakogusa Predicted Gene
- Lj1g3v2124920.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2124920.1 Non Chatacterized Hit- tr|I1KQB7|I1KQB7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45155
PE,83.27,0,seg,NULL; NUCLEOPORIN 155,NULL; NUCLEAR PORE COMPLEX
PROTEIN NUP155,Nucleoporin, Nup155-like; Nucleo,CUFF.28560.1
(3204 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC598168 similar to UniRef100_A7P3V0 Cluster: Chromosom... 850 0.0
gnl|LJGI|FS359846 similar to UniRef100_A7P3V0 Cluster: Chromosom... 710 0.0
gnl|LJGI|TC76174 similar to UniRef100_A7P3V0 Cluster: Chromosome... 371 e-101
gnl|LJGI|BP084847 homologue to UniRef100_A7P3V0 Cluster: Chromos... 206 6e-52
gnl|LJGI|AV779269 similar to UniRef100_A7P3V0 Cluster: Chromosom... 167 5e-40
>gnl|LJGI|DC598168 similar to UniRef100_A7P3V0 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 557
Score = 850 bits (429), Expect = 0.0
Identities = 522/553 (94%)
Strand = Plus / Plus
Query: 68 ctggaactcttatcctttctgatgcatcaccttcaactatgccttcactccttgttttga 127
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 5 ctggaactcttatcctgtctgatgcatcaccttcaactattccttcactccttgttttga 64
Query: 128 acagggattcaagcacgcagtcatcaccatcaggtaatctcgggacaggtattaggagtt 187
|||||||||||||||| ||||||||| |||||||||||||||||||||| || |||||||
Sbjct: 65 acagggattcaagcacacagtcatcatcatcaggtaatctcgggacaggaatgaggagtt 124
Query: 188 cccgggcatcacgggaatctgtatcttgtttaccagttgaaggaaggatgctttctgcgg 247
||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||| ||
Sbjct: 125 cccgggcattacgggaatctgtatcttctttaccagttgaaggaagaatgctttctgtgg 184
Query: 248 cagatgttttacctttgccagataatgcagctactatgtggtctctatattccgaaattg 307
|||||||||||||||||||||||| |||||||||| | ||||||||||||| |||||||
Sbjct: 185 cagatgttttacctttgccagatactgcagctactgtacggtctctatattcagaaattg 244
Query: 308 agtttggtggttatgagaacttgatggaatcatgtgaaagggcatcgggcaaactctggg 367
||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 245 agtttggtggttatgagaactcgatggaatcatgtgaaagggcatctggcaaactctggt 304
Query: 368 caaggggagacctctcaactcaacatatattgcctaggaggaggcttgtcgtcttcagca 427
| |||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||
Sbjct: 305 ctaggggagacctctcaactcaacatatattgccgaggaggaggattgtcatcttcagca 364
Query: 428 ccatgggcatgatggaaattgtttttaataggccactggacattctaaggcgactattag 487
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 365 ccatgggcatgatggaaattgtttttaacaggccactggacattctaaggcgactattag 424
Query: 488 agtccaattctccaagatcagttttggaagatttcttcaatcattttggtgctgatgagg 547
|||| |||||||||||||||||||| |||||||||||||||| ||||||||||| ||||
Sbjct: 425 agtcaaattctccaagatcagttttagaagatttcttcaatcgttttggtgctggcgagg 484
Query: 548 cagctgcaatgtgtctattgctagctgcaagaatagtacattctgaaaatcttattagca 607
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 485 cagctgcaatgtgtctaatgctagctgcaagaatagtgcattctgaaaatcttattagca 544
Query: 608 atgttatttctga 620
|||||||| ||||
Sbjct: 545 atgttattgctga 557
>gnl|LJGI|FS359846 similar to UniRef100_A7P3V0 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (9%)
Length = 715
Score = 710 bits (358), Expect = 0.0
Identities = 358/358 (100%)
Strand = Plus / Minus
Query: 2746 ggtgatggagctgttttaccgcttgacattatttgttttcacctagagaaggctggactg 2805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ggtgatggagctgttttaccgcttgacattatttgttttcacctagagaaggctggactg 656
Query: 2806 gagaggttaaattcaggggttgaacctgttggagatgaagatgttgcaagagcccttgtt 2865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 gagaggttaaattcaggggttgaacctgttggagatgaagatgttgcaagagcccttgtt 596
Query: 2866 tctgcttgtaatggtgcagctgaacctgtactggacgcatatgatcaattgttatcgaat 2925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 tctgcttgtaatggtgcagctgaacctgtactggacgcatatgatcaattgttatcgaat 536
Query: 2926 ggggctatttttccttccccaaatcttagattacgtatgttgagttctgttctagtgata 2985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ggggctatttttccttccccaaatcttagattacgtatgttgagttctgttctagtgata 476
Query: 2986 ctacatgagtgggctatgtctgtatattcccaaatcactatggagggagaattctcattg 3045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ctacatgagtgggctatgtctgtatattcccaaatcactatggagggagaattctcattg 416
Query: 3046 gaacatccagttgctagccaaggacttcgagacaagatcactagtgcggctaactggt 3103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 gaacatccagttgctagccaaggacttcgagacaagatcactagtgcggctaactggt 358
Score = 204 bits (103), Expect = 2e-51
Identities = 103/103 (100%)
Strand = Plus / Minus
Query: 3102 gtatatgactgaagtgaggagattagcccttccacagagccaaacacaaagtgtgtatag 3161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gtatatgactgaagtgaggagattagcccttccacagagccaaacacaaagtgtgtatag 277
Query: 3162 aggctttagagaactcgaagagtctgttttgttgaaatgataa 3204
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aggctttagagaactcgaagagtctgttttgttgaaatgataa 234
>gnl|LJGI|TC76174 similar to UniRef100_A7P3V0 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (10%)
Length = 653
Score = 371 bits (187), Expect = e-101
Identities = 247/267 (92%)
Strand = Plus / Plus
Query: 2751 tggagctgttttaccgcttgacattatttgttttcacctagagaaggctggactggagag 2810
||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 tggagctgttttaccacttgacattatttgtcttcacctagagaaggctggactggagag 60
Query: 2811 gttaaattcaggggttgaacctgttggagatgaagatgttgcaagagcccttgtttctgc 2870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttaaattcaggggttgaacctgttggagatgaagatgttgcaagagcccttgtttctgc 120
Query: 2871 ttgtaatggtgcagctgaacctgtactggacgcatatgatcaattgttatcgaatggggc 2930
|||||| ||| ||||||||||||| ||| | |||||||||||||||||||| || |||||
Sbjct: 121 ttgtaagggttcagctgaacctgttctgaatgcatatgatcaattgttatcaaacggggc 180
Query: 2931 tatttttccttccccaaatcttagattacgtatgttgagttctgttctagtgatactaca 2990
|||||| || ||||| ||||||||||| ||| | ||||| ||||||||||| ||||| |
Sbjct: 181 tattttgccatcccctaatcttagattgcgtttattgagatctgttctagttatactccg 240
Query: 2991 tgagtgggctatgtctgtatattccca 3017
||||||||||| |||||||||||||||
Sbjct: 241 tgagtgggctacgtctgtatattccca 267
Score = 182 bits (92), Expect = 9e-45
Identities = 143/160 (89%)
Strand = Plus / Plus
Query: 3026 tggagggagaattctcattggaacatccagttgctagccaaggacttcgagacaagatca 3085
||||||||| |||||||||||||| ||||||||||||||||| |||| ||||||||||
Sbjct: 303 tggagggaggattctcattggaacgcacagttgctagccaaggaattcgggacaagatca 362
Query: 3086 ctagtgcggctaactggtatatgactgaagtgaggagattagcccttccacagagccaaa 3145
||||||| || ||| ||||||||||||||||||||||| | ||||||||||||| |||||
Sbjct: 363 ctagtgcagcaaacaggtatatgactgaagtgaggagacttgcccttccacagaaccaaa 422
Query: 3146 cacaaagtgtgtatagaggctttagagaactcgaagagtc 3185
|| || ||||||| |||||||||||||||| ||||||||
Sbjct: 423 cagaagttgtgtatcgaggctttagagaacttgaagagtc 462
>gnl|LJGI|BP084847 homologue to UniRef100_A7P3V0 Cluster: Chromosome chr1 scaffold_5
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:,
partial (2%)
Length = 288
Score = 206 bits (104), Expect = 6e-52
Identities = 104/104 (100%)
Strand = Plus / Minus
Query: 3101 ggtatatgactgaagtgaggagattagcccttccacagagccaaacacaaagtgtgtata 3160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 ggtatatgactgaagtgaggagattagcccttccacagagccaaacacaaagtgtgtata 117
Query: 3161 gaggctttagagaactcgaagagtctgttttgttgaaatgataa 3204
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 gaggctttagagaactcgaagagtctgttttgttgaaatgataa 73
>gnl|LJGI|AV779269 similar to UniRef100_A7P3V0 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (4%)
Length = 554
Score = 167 bits (84), Expect = 5e-40
Identities = 141/160 (88%)
Strand = Plus / Minus
Query: 3026 tggagggagaattctcattggaacatccagttgctagccaaggacttcgagacaagatca 3085
||||||||| |||||||||||||| ||||||||||||||||| |||| ||||||||||
Sbjct: 518 tggagggaggattctcattggaacgcacagttgctagccaaggaattcgggacaagatca 459
Query: 3086 ctagtgcggctaactggtatatgactgaagtgaggagattagcccttccacagagccaaa 3145
||||||| || ||| ||||||||||||||||||||||| | |||||||| |||| || ||
Sbjct: 458 ctagtgcagccaacaggtatatgactgaagtgaggagacttgcccttccccagaacccaa 399
Query: 3146 cacaaagtgtgtatagaggctttagagaactcgaagagtc 3185
|| || ||||||| |||||||||||||||| ||||||||
Sbjct: 398 cagaagttgtgtatcgaggctttagagaacttgaagagtc 359