Miyakogusa Predicted Gene

Lj1g3v2095830.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2095830.1 tr|G7J418|G7J418_MEDTR Protein FAM135A
OS=Medicago truncatula GN=MTR_3g110690 PE=4 SV=1,81.99,0,DUF676,Domain
of unknown function DUF676, lipase-like; alpha/beta-Hydrolases,NULL;
UNCHARACTERIZED,N,CUFF.28478.1
         (1308 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69173 similar to UniRef100_A7Q6S3 Cluster: Chromosome...    58   1e-07
gnl|LJGI|TC72944 similar to UniRef100_Q0IPV9 Cluster: Os12g01648...    56   6e-07

>gnl|LJGI|TC69173 similar to UniRef100_A7Q6S3 Cluster: Chromosome chr12 scaffold_57,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_57, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (21%)
          Length = 695

 Score = 58.0 bits (29), Expect = 1e-07
 Identities = 89/109 (81%)
 Strand = Plus / Plus

                                                                       
Query: 817 cacttgggatatctttatagttcaaactcattgtttaattctggattgtggtttttgaag 876
           |||||||| ||| | || |||||||||||  | || ||||| ||||||||| | ||||| 
Sbjct: 13  cacttgggttatatgtacagttcaaactctatattcaattcaggattgtggctcttgaaa 72

                                                            
Query: 877 aagctaaaaggcacacaatgcattcatcagctcaccttcacagatgatc 925
           ||  | || |||||||||||||| ||||| || || |||||||||||||
Sbjct: 73  aaaatcaagggcacacaatgcatccatcaactaactttcacagatgatc 121



 Score = 52.0 bits (26), Expect = 9e-06
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                  
Query: 1009 cctcaggatggttatgtgccttaccattctgccagaat 1046
            ||||||||||||||||| || |||||||| ||||||||
Sbjct: 205  cctcaggatggttatgttccgtaccattcagccagaat 242


>gnl|LJGI|TC72944 similar to UniRef100_Q0IPV9 Cluster: Os12g0164800 protein; n=1; Oryza
            sativa Japonica Group|Rep: Os12g0164800 protein - Oryza
            sativa subsp. japonica (Rice), partial (3%)
          Length = 501

 Score = 56.0 bits (28), Expect = 6e-07
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                            
Query: 1255 gacatttttgcaaagttcataatgtggtcttt 1286
            ||||||||||| ||||||||||||||||||||
Sbjct: 7    gacatttttgcgaagttcataatgtggtcttt 38