Miyakogusa Predicted Gene
- Lj1g3v1932600.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1932600.1 Non Chatacterized Hit- tr|I1K915|I1K915_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.33485
PE,85.28,0,coiled-coil,NULL; RING/U-box,NULL; zf-CHY,Zinc finger,
CHY-type; zf-RING_2,Zinc finger, RING-type; R,CUFF.28187.1
(864 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75207 similar to UniRef100_Q5JL96 Cluster: Zinc finge... 852 0.0
gnl|LJGI|TC68427 similar to UniRef100_Q1KSI4 Cluster: Ubiqutin l... 729 0.0
gnl|LJGI|CN824938 similar to UniRef100_Q6E880 Cluster: Cytochrom... 343 1e-93
gnl|LJGI|AV412414 92 7e-18
gnl|LJGI|TC82502 similar to UniRef100_A7QNP4 Cluster: Chromosome... 78 1e-13
gnl|LJGI|FS331080 similar to UniRef100_A7PQP8 Cluster: Chromosom... 76 4e-13
gnl|LJGI|TC57441 similar to UniRef100_A7PQP8 Cluster: Chromosome... 76 4e-13
gnl|LJGI|TC79944 similar to UniRef100_A7PDT8 Cluster: Chromosome... 58 9e-08
gnl|LJGI|DC599702 similar to UniRef100_Q5JL96 Cluster: Zinc fing... 54 1e-06
>gnl|LJGI|TC75207 similar to UniRef100_Q5JL96 Cluster: Zinc finger protein ZFP-like;
n=1; Oryza sativa Japonica Group|Rep: Zinc finger
protein ZFP-like - Oryza sativa subsp. japonica (Rice),
partial (32%)
Length = 613
Score = 852 bits (430), Expect = 0.0
Identities = 430/430 (100%)
Strand = Plus / Plus
Query: 1 atgggagaggtggcagtaatgcactctgagccactgcagtttgagtgcaatgacatgaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 atgggagaggtggcagtaatgcactctgagccactgcagtttgagtgcaatgacatgaac 243
Query: 61 catattactgagaaagatgtttgtaatcaacaatcaaatgaagaggacagagagatcaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 catattactgagaaagatgtttgtaatcaacaatcaaatgaagaggacagagagatcaat 303
Query: 121 gacttgagggacagaggatatatggaacatggatgtcaacattaccggaggagatgtcga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gacttgagggacagaggatatatggaacatggatgtcaacattaccggaggagatgtcga 363
Query: 181 attagggccccctgttgcaatgagatatttgattgtcgccattgtcacaatgaggcaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 attagggccccctgttgcaatgagatatttgattgtcgccattgtcacaatgaggcaaaa 423
Query: 241 aatgatatcaacattgatcagaagtatagacacgacattccccgccatcaagtcaaacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 aatgatatcaacattgatcagaagtatagacacgacattccccgccatcaagtcaaacag 483
Query: 301 gtgatatgttcactttgtcggacagaacaagaggttcagcagaactgtatcaactgtggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gtgatatgttcactttgtcggacagaacaagaggttcagcagaactgtatcaactgtggt 543
Query: 361 gtttgcatgggcaagtacttctgtgcgacatgtaaactctttgatgatgatgtgtctaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gtttgcatgggcaagtacttctgtgcgacatgtaaactctttgatgatgatgtgtctaag 603
Query: 421 cagcagtacc 430
||||||||||
Sbjct: 604 cagcagtacc 613
>gnl|LJGI|TC68427 similar to UniRef100_Q1KSI4 Cluster: Ubiqutin ligase; n=1;
Phaseolus vulgaris|Rep: Ubiqutin ligase - Phaseolus
vulgaris (Kidney bean) (French bean), partial (83%)
Length = 750
Score = 729 bits (368), Expect = 0.0
Identities = 368/368 (100%)
Strand = Plus / Plus
Query: 497 gttgttgttactcaactcagctgaaagagagtcacctttgtgtggaaggggcgatgcatc 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttgttgttactcaactcagctgaaagagagtcacctttgtgtggaaggggcgatgcatc 60
Query: 557 acaactgccccgtttgttttgagtatttgtttgaatctgtgaatgatgtcactgttatgc 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acaactgccccgtttgttttgagtatttgtttgaatctgtgaatgatgtcactgttatgc 120
Query: 617 tctgtggacacacaatccataaaagctgcctgaacgaaatgagggagcatttccagtacg 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tctgtggacacacaatccataaaagctgcctgaacgaaatgagggagcatttccagtacg 180
Query: 677 cgtgtcctctgtgctctaaatcagtttgtgacatgtcaaaggtttgggagaaattggact 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgtgtcctctgtgctctaaatcagtttgtgacatgtcaaaggtttgggagaaattggact 240
Query: 737 tggagattgctgctacaccaatgcctgaaccatacctgaataaaatggtttggatccttt 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggagattgctgctacaccaatgcctgaaccatacctgaataaaatggtttggatccttt 300
Query: 797 gcaatgattgtggcaaaacttctcaagtccggttccatcttgttgctcaaaagtgcatga 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcaatgattgtggcaaaacttctcaagtccggttccatcttgttgctcaaaagtgcatga 360
Query: 857 actgcaaa 864
||||||||
Sbjct: 361 actgcaaa 368
>gnl|LJGI|CN824938 similar to UniRef100_Q6E880 Cluster: Cytochrome c oxidase subunit
I; n=1; Enchenopa sp. CPL-2004c|Rep: Cytochrome c
oxidase, partial (3%)
Length = 689
Score = 343 bits (173), Expect = 1e-93
Identities = 173/173 (100%)
Strand = Plus / Plus
Query: 1 atgggagaggtggcagtaatgcactctgagccactgcagtttgagtgcaatgacatgaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 atgggagaggtggcagtaatgcactctgagccactgcagtttgagtgcaatgacatgaac 576
Query: 61 catattactgagaaagatgtttgtaatcaacaatcaaatgaagaggacagagagatcaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 catattactgagaaagatgtttgtaatcaacaatcaaatgaagaggacagagagatcaat 636
Query: 121 gacttgagggacagaggatatatggaacatggatgtcaacattaccggaggag 173
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 gacttgagggacagaggatatatggaacatggatgtcaacattaccggaggag 689
>gnl|LJGI|AV412414
Length = 402
Score = 91.7 bits (46), Expect = 7e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 345 ctgtatcaactgtggtgtttgcatgggcaagtacttctgtgcgacatgtaaactctttga 404
|||||||| ||||| ||||||||||||||||||||| |||| |||||| |||||||||||
Sbjct: 155 ctgtatcatctgtgatgtttgcatgggcaagtacttttgtgggacatgcaaactctttga 214
Query: 405 tgatgatgtg 414
||||| ||||
Sbjct: 215 tgatggtgtg 224
>gnl|LJGI|TC82502 similar to UniRef100_A7QNP4 Cluster: Chromosome undetermined
scaffold_133, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_133,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (44%)
Length = 1195
Score = 77.8 bits (39), Expect = 1e-13
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 334 gttcagcagaactgtatcaactgtggtgtttgcatgggcaagtacttctgtgcgacatgt 393
||||||||| ||| || |||||||| || ||||||||||||||||| ||||| |||||
Sbjct: 693 gttcagcagtgctgcataaactgtggagtatgcatgggcaagtacttttgtgctacatgc 752
Query: 394 aaactctttgatgatgatg 412
||| |||||||||||||||
Sbjct: 753 aaattctttgatgatgatg 771
>gnl|LJGI|FS331080 similar to UniRef100_A7PQP8 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (68%)
Length = 795
Score = 75.8 bits (38), Expect = 4e-13
Identities = 77/90 (85%)
Strand = Plus / Plus
Query: 322 acagaacaagaggttcagcagaactgtatcaactgtggtgtttgcatgggcaagtacttc 381
||||||||||| ||||| ||| |||| || || ||||| || |||||||||||||||||
Sbjct: 400 acagaacaagatgttcaacagtactgcataaattgtggagtatgcatgggcaagtacttt 459
Query: 382 tgtgcgacatgtaaactctttgatgatgat 411
||||| ||||| ||| ||||||| ||||||
Sbjct: 460 tgtgctacatgcaaattctttgacgatgat 489
>gnl|LJGI|TC57441 similar to UniRef100_A7PQP8 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (93%)
Length = 1250
Score = 75.8 bits (38), Expect = 4e-13
Identities = 77/90 (85%)
Strand = Plus / Plus
Query: 322 acagaacaagaggttcagcagaactgtatcaactgtggtgtttgcatgggcaagtacttc 381
||||||||||| ||||| ||| |||| || || ||||| || |||||||||||||||||
Sbjct: 347 acagaacaagatgttcaacagtactgcataaattgtggagtatgcatgggcaagtacttt 406
Query: 382 tgtgcgacatgtaaactctttgatgatgat 411
||||| ||||| ||| ||||||| ||||||
Sbjct: 407 tgtgctacatgcaaattctttgacgatgat 436
Score = 56.0 bits (28), Expect = 4e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 754 ccaatgcctgaaccatacctgaataaaatggtttggatcctttgcaatgattgtgg 809
|||||||||||| ||||| ||||| ||| ||||||| |||||||||||||||||
Sbjct: 779 ccaatgcctgaaacatacagaaataagatgatttggatactttgcaatgattgtgg 834
>gnl|LJGI|TC79944 similar to UniRef100_A7PDT8 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 1167
Score = 58.0 bits (29), Expect = 9e-08
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 332 aggttcagcagaactgtatcaactgtggtgtttgcatgggcaagtacttctgtgcgacat 391
|||||||||| |||| || ||| |||| || | ||||||||||||||| ||||| ||||
Sbjct: 643 aggttcagcaatactgcataaacagtggagtatccatgggcaagtacttttgtgctacat 702
Query: 392 gtaaactctttgatgatgatg 412
| ||| | |||||||||||||
Sbjct: 703 gcaaattatttgatgatgatg 723
>gnl|LJGI|DC599702 similar to UniRef100_Q5JL96 Cluster: Zinc finger protein ZFP-like;
n=1; Oryza sativa Japonica Group|Rep: Zinc finger
protein ZFP-like - Oryza sativa subsp. japonica (Rice),
partial (9%)
Length = 582
Score = 54.0 bits (27), Expect = 1e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 366 catgggcaagtacttctgtgcgacatgtaaactctttgatgatgatg 412
||||||||||||||| ||||| ||||| ||| | |||||||||||||
Sbjct: 426 catgggcaagtacttttgtgctacatgcaaattatttgatgatgatg 472