Miyakogusa Predicted Gene
- Lj1g3v1914960.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1914960.1 tr|B9H9R8|B9H9R8_POPTR 3-ketoacyl-CoA synthase
OS=Populus trichocarpa GN=POPTRDRAFT_561843 PE=3 SV=1,84.34,0,FAMILY
NOT NAMED,NULL; Thiolase-like,Thiolase-like; no
description,Thiolase-like, subgroup; seg,NULL,CUFF.28129.1
(1524 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO035043 homologue to UniRef100_A7P5K1 Cluster: Chromos... 1049 0.0
gnl|LJGI|TC59598 homologue to UniRef100_A7NWY4 Cluster: Chromoso... 103 3e-21
gnl|LJGI|AU088871 similar to UniRef100_A7P905 Cluster: Chromosom... 72 1e-11
gnl|LJGI|TC59765 similar to UniRef100_A7P905 Cluster: Chromosome... 72 1e-11
gnl|LJGI|AV412738 similar to UniRef100_A7NWY4 Cluster: Chromosom... 68 2e-10
gnl|LJGI|TC82055 homologue to UniRef100_A7NWY4 Cluster: Chromoso... 68 2e-10
gnl|LJGI|AV426594 similar to UniRef100_A7P5K1 Cluster: Chromosom... 58 2e-07
gnl|LJGI|TC65739 homologue to UniRef100_A7P5K1 Cluster: Chromoso... 54 3e-06
>gnl|LJGI|GO035043 homologue to UniRef100_A7P5K1 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (35%)
Length = 538
Score = 1049 bits (529), Expect = 0.0
Identities = 535/537 (99%)
Strand = Plus / Minus
Query: 744 ccaggtccacccaaattcttatgccctggtcattagcatggaaaatatcaccttgaactg 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ccaggtccacccaaattcttatgccctggtcattagcatggaaaatatcaccttgaactg 479
Query: 804 gtactttgggaacgatagatccatgcttgtttcaaattgtttgttcagaatgggaggagc 863
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 478 gtactttgggaacgatagatccatgcttgtttcaaattgtttgtccagaatgggaggagc 419
Query: 864 tgcaatcttactttctaacaagagatgggatagacgccgatctaagtatcagttggttca 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tgcaatcttactttctaacaagagatgggatagacgccgatctaagtatcagttggttca 359
Query: 924 cactgttaggactcacaaaggggccgatgataggtgcttctcctgtgtaacacaaaaaga 983
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 358 cactgttaggactcacaaaggggccgatgataagtgcttctcctgtgtaacacaaaaaga 299
Query: 984 ggattccacagggagcgttggtgtttctttgtcaagggatctcatgtcagtggctgggga 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ggattccacagggagcgttggtgtttctttgtcaagggatctcatgtcagtggctgggga 239
Query: 1044 tgctttgaagaccaacatcaccactctgggtcctctagtgctgccaatgtctgaacaatt 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 tgctttgaagaccaacatcaccactctgggtcctctagtgctgccaatgtctgaacaatt 179
Query: 1104 gctcttttttgccaccttggttgcaagaaaactcttcaagatgaaagtaaaaccttatat 1163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 gctcttttttgccaccttggttgcaagaaaactcttcaagatgaaagtaaaaccttatat 119
Query: 1164 ccctgattttaagttggcatttgaccatttctgcattcatgccgggggaagagcagtgct 1223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 ccctgattttaagttggcatttgaccatttctgcattcatgccgggggaagagcagtgct 59
Query: 1224 ggatgaattagagaggaacctccaactcacagactggcacatggaaccttcaaggat 1280
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 ggatgaattagagaggaacctccaactcacagactggcacatggaaccttcaaggat 2
>gnl|LJGI|TC59598 homologue to UniRef100_A7NWY4 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (32%)
Length = 786
Score = 103 bits (52), Expect = 3e-21
Identities = 199/248 (80%)
Strand = Plus / Plus
Query: 1120 ttggttgcaagaaaactcttcaagatgaaagtaaaaccttatatccctgattttaagttg 1179
||||||||||||||| | |||||| |||| |||| || || ||||| ||||||||| |
Sbjct: 114 ttggttgcaagaaaagtgttcaaggtgaagataaagccatacatcccagattttaagcta 173
Query: 1180 gcatttgaccatttctgcattcatgccgggggaagagcagtgctggatgaattagagagg 1239
|| ||||| || || ||||| | ||| || |||||||||||| ||||||| || ||||
Sbjct: 174 gcttttgagcacttttgcatccgtgctggtggaagagcagtgttggatgagttggagaaa 233
Query: 1240 aacctccaactcacagactggcacatggaaccttcaaggatgaccctttacaggtttggc 1299
|| || | |||| || ||||||||||| |||||||| ||||| || | || |||||
Sbjct: 234 aatcttgacctcagtgattggcacatggagccttcaagaatgactctaaatagatttggt 293
Query: 1300 aacacttcaagtagctcgttgtggttcgaattggcttacgctgaagccaaagggagaatc 1359
|||||||| || ||||| ||||||| ||| | || ||| ||||||| ||||||||||||
Sbjct: 294 aacacttctagcagctccttgtggtatgaacttgcatacactgaagctaaagggagaatc 353
Query: 1360 agaaaagg 1367
||||||||
Sbjct: 354 agaaaagg 361
>gnl|LJGI|AU088871 similar to UniRef100_A7P905 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (33%)
Length = 594
Score = 71.9 bits (36), Expect = 1e-11
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 1002 tggtgtttctttgtcaagggatctcatgtcagtggctggggatgctttgaagaccaacat 1061
||||||||||||||||| |||||||||| | | ||||| | ||||||||||| |||||
Sbjct: 185 tggtgtttctttgtcaaaggatctcatggctattgctggtggagctttgaagactaacat 244
Query: 1062 caccactctgggtcctctagtgct 1085
||| ||| |||||||||| |||||
Sbjct: 245 cacaactttgggtcctcttgtgct 268
>gnl|LJGI|TC59765 similar to UniRef100_A7P905 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (38%)
Length = 806
Score = 71.9 bits (36), Expect = 1e-11
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 1002 tggtgtttctttgtcaagggatctcatgtcagtggctggggatgctttgaagaccaacat 1061
||||||||||||||||| |||||||||| | | ||||| | ||||||||||| |||||
Sbjct: 96 tggtgtttctttgtcaaaggatctcatggctattgctggtggagctttgaagactaacat 155
Query: 1062 caccactctgggtcctctagtgct 1085
||| ||| |||||||||| |||||
Sbjct: 156 cacaactttgggtcctcttgtgct 179
>gnl|LJGI|AV412738 similar to UniRef100_A7NWY4 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 397
Score = 67.9 bits (34), Expect = 2e-10
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 778 agcatggaaaatatcaccttgaactggtactttgggaacgatagatccatgcttgtttca 837
|||||||| || ||||| | |||||||||||||| ||||| ||||| ||| | || |||
Sbjct: 171 agcatggagaacatcactctcaactggtactttggcaacgacagatcaatgttagtctca 230
Query: 838 aattgtttgttcagaatgggaggagctgca 867
||||| | |||||||||||||||||||||
Sbjct: 231 aattgcctcttcagaatgggaggagctgca 260
>gnl|LJGI|TC82055 homologue to UniRef100_A7NWY4 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 465
Score = 67.9 bits (34), Expect = 2e-10
Identities = 125/154 (81%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 718 tctattgatcttgccaaggatcttctccaggtccacccaaattcttatgccctggtcatt 777
||||| || ||||||||| | || |||||||| || || || ||||||||| | || |
Sbjct: 19 tctatagaccttgccaagcagctactccaggtgcatcccaactcttatgccttagtagtg 78
Query: 778 agcatggaaaatatcaccttgaactggtactttgggaacga-tagatccatgcttgtttc 836
||||||||||| ||||| |||||||||| ||||| ||| | | || | ||||| || ||
Sbjct: 79 agcatggaaaacatcactctgaactggtattttggcaacaactcgaccaatgctagtctc 138
Query: 837 aaattgtttgttcagaatgggaggagctgcaatc 870
||||||| | ||||||||||| ||||||||||||
Sbjct: 139 aaattgtctcttcagaatgggtggagctgcaatc 172
>gnl|LJGI|AV426594 similar to UniRef100_A7P5K1 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 415
Score = 58.0 bits (29), Expect = 2e-07
Identities = 119/149 (79%)
Strand = Plus / Plus
Query: 721 attgatcttgccaaggatcttctccaggtccacccaaattcttatgccctggtcattagc 780
||||||||||| || || ||||| ||||| ||||| || || ||||| |||| |||||
Sbjct: 25 attgatcttgctaaagaacttcttcaggttcaccccaactcctatgcattggtggttagc 84
Query: 781 atggaaaatatcaccttgaactggtactttgggaacgatagatccatgcttgtttcaaat 840
||||| || ||||| ||||| ||||| ||||| ||| | |||| |||||||||||
Sbjct: 85 atggagaacatcactttgaattggtatccagggaatgatcgctccaaacttgtttcaaac 144
Query: 841 tgtttgttcagaatgggaggagctgcaat 869
||||| ||| | |||||||| ||||||||
Sbjct: 145 tgtttattccgcatgggaggggctgcaat 173
>gnl|LJGI|TC65739 homologue to UniRef100_A7P5K1 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (26%)
Length = 668
Score = 54.0 bits (27), Expect = 3e-06
Identities = 90/111 (81%)
Strand = Plus / Plus
Query: 1132 aaactcttcaagatgaaagtaaaaccttatatccctgattttaagttggcatttgaccat 1191
||||||||||||||||| | || |||||||| || ||||| ||| | || ||||| ||
Sbjct: 21 aaactcttcaagatgaagatcaagccttatattccagatttcaagctagcttttgaacac 80
Query: 1192 ttctgcattcatgccgggggaagagcagtgctggatgaattagagaggaac 1242
|||||||||||||| || || ||||| || ||||||| || |||| ||||
Sbjct: 81 ttctgcattcatgctggtggcagagctgttttggatgagttggagaagaac 131