Miyakogusa Predicted Gene
- Lj1g3v1650140.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1650140.1 Non Chatacterized Hit- tr|D7KXQ9|D7KXQ9_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,75.61,0.00000000002,seg,NULL; SUBFAMILY NOT NAMED,NULL;
THIOREDOXIN-RELATED,Thioredoxin;
Thioredoxin-like,Thioredoxin-li,CUFF.27639.1
(645 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63624 similar to UniRef100_A7NTV9 Cluster: Chromosome... 1279 0.0
gnl|LJGI|TC78279 similar to UniRef100_A7NTV9 Cluster: Chromosome... 1271 0.0
gnl|LJGI|GO022538 similar to UniRef100_A7NTV9 Cluster: Chromosom... 1205 0.0
gnl|LJGI|GO009362 similar to UniRef100_A7QV04 Cluster: Chromosom... 52 4e-06
gnl|LJGI|BP055418 homologue to UniRef100_Q555X5 Cluster: MIZ typ... 52 4e-06
gnl|LJGI|BP039346 similar to UniRef100_Q9E938 Cluster: ICP4 prot... 52 4e-06
gnl|LJGI|TC79965 similar to UniRef100_Q6K7P2 Cluster: Transcript... 52 4e-06
gnl|LJGI|TC73106 similar to UniRef100_A7QX90 Cluster: Chromosome... 52 4e-06
gnl|LJGI|TC68954 similar to UniRef100_A7PPD1 Cluster: Chromosome... 52 4e-06
gnl|LJGI|TC67702 homologue to UniRef100_A7Q0J8 Cluster: Chromoso... 52 4e-06
>gnl|LJGI|TC63624 similar to UniRef100_A7NTV9 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (58%)
Length = 860
Score = 1279 bits (645), Expect = 0.0
Identities = 645/645 (100%)
Strand = Plus / Plus
Query: 1 atgcccctgattgccattcacacgcagaatcatctctcctttgccagcatcaaactacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 atgcccctgattgccattcacacgcagaatcatctctcctttgccagcatcaaactacta 212
Query: 61 ctagacccatgtttacatggggaatctaggactagaatttcccatgtacctttcagcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 ctagacccatgtttacatggggaatctaggactagaatttcccatgtacctttcagcttg 272
Query: 121 gttcataataggcacagtcatggaaaactatgtcttggggggataaacattgaaccttcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gttcataataggcacagtcatggaaaactatgtcttggggggataaacattgaaccttcg 332
Query: 181 atcaaaatcagggggataagatcagttgcaggagaatatcaacaagatgaagatgaagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 atcaaaatcagggggataagatcagttgcaggagaatatcaacaagatgaagatgaagat 392
Query: 241 gaagatgaggatgtgtgtcctgttgaatgtgtaagagaattcaagactgacgaagagttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gaagatgaggatgtgtgtcctgttgaatgtgtaagagaattcaagactgacgaagagttc 452
Query: 301 tgcaaaattctggataaggctaaacgagctgggtctctggtggtggttgatttctttcgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tgcaaaattctggataaggctaaacgagctgggtctctggtggtggttgatttctttcgc 512
Query: 361 acctcttgtggaagctgcaagtacatagagcagggttttgctaaattgtgcaggaaatct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 acctcttgtggaagctgcaagtacatagagcagggttttgctaaattgtgcaggaaatct 572
Query: 421 ggtaaccatgatgctccagttatctttctaaagcataatgttattgatgagtatgatgag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ggtaaccatgatgctccagttatctttctaaagcataatgttattgatgagtatgatgag 632
Query: 481 gaatccgaggttgctgagcgacttagaatcagggctgtgcctcttttccatttctacaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 gaatccgaggttgctgagcgacttagaatcagggctgtgcctcttttccatttctacaaa 692
Query: 541 gatgggatcctgttggaagcatttccaaccagggacaaagctaggattgttgaagccatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 gatgggatcctgttggaagcatttccaaccagggacaaagctaggattgttgaagccatt 752
Query: 601 ctcaagtattcatctcttgaagcagaagatattttgatttaactt 645
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 ctcaagtattcatctcttgaagcagaagatattttgatttaactt 797
>gnl|LJGI|TC78279 similar to UniRef100_A7NTV9 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (58%)
Length = 1002
Score = 1271 bits (641), Expect = 0.0
Identities = 644/645 (99%)
Strand = Plus / Plus
Query: 1 atgcccctgattgccattcacacgcagaatcatctctcctttgccagcatcaaactacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 atgcccctgattgccattcacacgcagaatcatctctcctttgccagcatcaaactacta 149
Query: 61 ctagacccatgtttacatggggaatctaggactagaatttcccatgtacctttcagcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 ctagacccatgtttacatggggaatctaggactagaatttcccatgtacctttcagcttg 209
Query: 121 gttcataataggcacagtcatggaaaactatgtcttggggggataaacattgaaccttcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gttcataataggcacagtcatggaaaactatgtcttggggggataaacattgaaccttcg 269
Query: 181 atcaaaatcagggggataagatcagttgcaggagaatatcaacaagatgaagatgaagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 atcaaaatcagggggataagatcagttgcaggagaatatcaacaagatgaagatgaagat 329
Query: 241 gaagatgaggatgtgtgtcctgttgaatgtgtaagagaattcaagactgacgaagagttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gaagatgaggatgtgtgtcctgttgaatgtgtaagagaattcaagactgacgaagagttc 389
Query: 301 tgcaaaattctggataaggctaaacgagctgggtctctggtggtggttgatttctttcgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tgcaaaattctggataaggctaaacgagctgggtctctggtggtggttgatttctttcgc 449
Query: 361 acctcttgtggaagctgcaagtacatagagcagggttttgctaaattgtgcaggaaatct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 acctcttgtggaagctgcaagtacatagagcagggttttgctaaattgtgcaggaaatct 509
Query: 421 ggtaaccatgatgctccagttatctttctaaagcataatgttattgatgagtatgatgag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ggtaaccatgatgctccagttatctttctaaagcataatgttattgatgagtatgatgag 569
Query: 481 gaatccgaggttgctgagcgacttagaatcagggctgtgcctcttttccatttctacaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gaatccgaggttgctgagcgacttagaatcagggctgtgcctcttttccatttctacaaa 629
Query: 541 gatgggatcctgttggaagcatttccaaccagggacaaagctaggattgttgaagccatt 600
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 630 gatgggatcctgttggaagcatttcccaccagggacaaagctaggattgttgaagccatt 689
Query: 601 ctcaagtattcatctcttgaagcagaagatattttgatttaactt 645
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 ctcaagtattcatctcttgaagcagaagatattttgatttaactt 734
>gnl|LJGI|GO022538 similar to UniRef100_A7NTV9 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 777
Score = 1205 bits (608), Expect = 0.0
Identities = 625/628 (99%), Gaps = 2/628 (0%)
Strand = Plus / Plus
Query: 1 atgcccctgattgccattcacacgcagaatcatctctcctttgccagcatcaaactacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 atgcccctgattgccattcacacgcagaatcatctctcctttgccagcatcaaactacta 211
Query: 61 ctagacccatgtttacatggggaatctaggactagaatttcccatgtacctttcagcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 ctagacccatgtttacatggggaatctaggactagaatttcccatgtacctttcagcttg 271
Query: 121 gttcataataggcacagtcatggaaaactatgtcttggggggataaacattgaaccttcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gttcataataggcacagtcatggaaaactatgtcttggggggataaacattgaaccttcg 331
Query: 181 atcaaaatcagggggataagatcagttgcaggagaatatcaacaagatgaagatgaagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 atcaaaatcagggggataagatcagttgcaggagaatatcaacaagatgaagatgaagat 391
Query: 241 gaagatgaggatgtgtgtcctgttgaatgtgtaagagaattcaagactgacgaagagttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gaagatgaggatgtgtgtcctgttgaatgtgtaagagaattcaagactgacgaagagttc 451
Query: 301 tgcaaaattctggataaggctaaacgagctgggtctctggtggtggttgatttctttcgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tgcaaaattctggataaggctaaacgagctgggtctctggtggtggttgatttctttcgc 511
Query: 361 acctcttgtggaagctgcaagtacatagagcagggttttgctaaattgtgcaggaaatct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 acctcttgtggaagctgcaagtacatagagcagggttttgctaaattgtgcaggaaatct 571
Query: 421 ggtaaccatgatgctccagttatctttctaaagcataatgttattgatgagtatgatgag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ggtaaccatgatgctccagttatctttctaaagcataatgttattgatgagtatgatgag 631
Query: 481 gaatccgaggttgctgagcgacttagaatcagggctgtgcctcttttccatttctacaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gaatccgaggttgctgagcgacttagaatcagggctgtgcctcttttccatttctacaaa 691
Query: 541 gatgggatcctgttggaagcatttccaaccagggacaaagctaggattgttgaagccatt 600
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 692 gatgggatcctgttggaagcatttcc-accagggacaaagctaggatcgttgaagccatt 750
Query: 601 ctcaagtattcatctcttgaagcagaag 628
||| ||||||||||||||||||||||||
Sbjct: 751 ctc-agtattcatctcttgaagcagaag 777
>gnl|LJGI|GO009362 similar to UniRef100_A7QV04 Cluster: Chromosome undetermined
scaffold_183, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_183,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (25%)
Length = 750
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 224 aagatgaagatgaagatgaagatgaggatg 253
||||||||||||||||||||||||| ||||
Sbjct: 72 aagatgaagatgaagatgaagatgaagatg 43
>gnl|LJGI|BP055418 homologue to UniRef100_Q555X5 Cluster: MIZ type Zn
finger-containing protein; n=1; Dictyostelium
discoideum|Rep: MIZ type Zn finger-containing protein -
Dictyostelium discoideum (Slime mold), partial (3%)
Length = 526
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 224 aagatgaagatgaagatgaagatgaggatg 253
||||||||||||||||||||||||| ||||
Sbjct: 31 aagatgaagatgaagatgaagatgaagatg 2
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 224 aagatgaagatgaagatgaagatgaggatg 253
||||||||||||||||||||||||| ||||
Sbjct: 37 aagatgaagatgaagatgaagatgaagatg 8
>gnl|LJGI|BP039346 similar to UniRef100_Q9E938 Cluster: ICP4 protein; n=1; Gallid
herpesvirus 3|Rep: ICP4 protein - Gallid herpesvirus 3,
partial (1%)
Length = 470
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 224 aagatgaagatgaagatgaagatgaggatg 253
||||||||||||||||||||||||| ||||
Sbjct: 371 aagatgaagatgaagatgaagatgaagatg 400
>gnl|LJGI|TC79965 similar to UniRef100_Q6K7P2 Cluster: Transcription factor
PCF3-like; n=1; Oryza sativa Japonica Group|Rep:
Transcription factor PCF3-like - Oryza sativa subsp.
japonica (Rice), partial (49%)
Length = 771
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 224 aagatgaagatgaagatgaagatgaggatg 253
||||||||||||||||||||||||| ||||
Sbjct: 159 aagatgaagatgaagatgaagatgaagatg 130
>gnl|LJGI|TC73106 similar to UniRef100_A7QX90 Cluster: Chromosome undetermined
scaffold_215, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_215,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (14%)
Length = 1300
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 224 aagatgaagatgaagatgaagatgaggatg 253
||||||||||||||||||||||||| ||||
Sbjct: 141 aagatgaagatgaagatgaagatgaagatg 112
>gnl|LJGI|TC68954 similar to UniRef100_A7PPD1 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (79%)
Length = 1515
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 224 aagatgaagatgaagatgaagatgaggatg 253
||||||||||||||||||||||||| ||||
Sbjct: 299 aagatgaagatgaagatgaagatgaagatg 270
>gnl|LJGI|TC67702 homologue to UniRef100_A7Q0J8 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 610
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 224 aagatgaagatgaagatgaagatgaggatg 253
||||||||||||||||||||||||| ||||
Sbjct: 123 aagatgaagatgaagatgaagatgaagatg 94