Miyakogusa Predicted Gene

Lj1g3v1526180.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1526180.1 Non Chatacterized Hit- tr|A5ALW2|A5ALW2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,47.49,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
coiled-coil,NULL; DUF659,Domain of unknow,CUFF.27455.1
         (2133 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV781265                                                     680   0.0  

>gnl|LJGI|AV781265 
          Length = 480

 Score =  680 bits (343), Expect = 0.0
 Identities = 358/363 (98%)
 Strand = Plus / Minus

                                                                        
Query: 1771 cgttttcactactatgatatccctgatccccttctcttgaatgacattgattatagtaat 1830
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480  cgttttcactactatgatatccctgatccccttctcttgaatgacattgattatagtaat 421

                                                                        
Query: 1831 gagtggctggtgggagaaatgagtgaagatggagaaactaataaagaggagttggttttt 1890
            ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||
Sbjct: 420  gagtggctggtgggagaaatgagtgaagatggagaaactaataaagaggaagtggttttt 361

                                                                        
Query: 1891 aatgatgatacttttacttggggagctgttcctcacgtggttggggtaggtgagcctgaa 1950
            ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 360  aatgatgatacttttacttggggagctgttcctcacgtgcttggggtaggtgagcctgaa 301

                                                                        
Query: 1951 acactcactaagtggcaagcaagattgaagaacaaagaaacttcaaggccttccagctct 2010
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 300  acactcactaagtggcaagccagattgaagaacaaagaaacttcaaggccttccagctct 241

                                                                        
Query: 2011 agggcaagggatattatagcagatgcagaggaagaagttacatatgatgtagaaatcgaa 2070
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240  agggcaagggatattatagcagatgcagaggaagaagttacatatgatgtagaaatcgaa 181

                                                                        
Query: 2071 gaggaagatgaagcagcgatcaacaagtatatatatgaagaaatgtataaagatgatgag 2130
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 180  gaggaagatgaagcagcgatcgacaagtatatatatgaagaaatgtataaagatgatgag 121

               
Query: 2131 agc 2133
            |||
Sbjct: 120  agc 118