Miyakogusa Predicted Gene
- Lj1g3v1287000.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1287000.1 Non Chatacterized Hit- tr|I3S7N0|I3S7N0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.43,0,zf-RING_2,Zinc finger, RING-type; no description,Zinc
finger, RING/FYVE/PHD-type; seg,NULL; RING/U-b,CUFF.27063.1
(690 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63970 similar to UniRef100_A7QBB7 Cluster: Chromosome... 1368 0.0
gnl|LJGI|TC70057 similar to UniRef100_Q9LS98 Cluster: Similarity... 92 5e-18
gnl|LJGI|GO036106 similar to UniRef100_Q9LS98 Cluster: Similarit... 56 3e-07
>gnl|LJGI|TC63970 similar to UniRef100_A7QBB7 Cluster: Chromosome chr4 scaffold_73,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_73, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 865
Score = 1368 bits (690), Expect = 0.0
Identities = 690/690 (100%)
Strand = Plus / Plus
Query: 1 atggattcttctacttccttcacttcaccactcttacatgaccttcttgaaggattccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 atggattcttctacttccttcacttcaccactcttacatgaccttcttgaaggattccac 109
Query: 61 tcaagaagattgctccttcaagcaaaccccccagcttcaacaatcagccatgattcagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 tcaagaagattgctccttcaagcaaaccccccagcttcaacaatcagccatgattcagaa 169
Query: 121 aaagcatatcttggggatggtaattttgatgcaaatgttattatggtcctctcagtcctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 aaagcatatcttggggatggtaattttgatgcaaatgttattatggtcctctcagtcctg 229
Query: 181 ttgtgtgctcttatttgctcgctgggtttgaactccatcataaggtgtgcactaagatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 ttgtgtgctcttatttgctcgctgggtttgaactccatcataaggtgtgcactaagatgt 289
Query: 241 tccaatttagttgtcataggtgactcagttaccaactctccaactagagcagcaaacact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 tccaatttagttgtcataggtgactcagttaccaactctccaactagagcagcaaacact 349
Query: 301 ggagtcaagaagaaagctctcaagactttccctgtagtaagttactctgctgaactgaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ggagtcaagaagaaagctctcaagactttccctgtagtaagttactctgctgaactgaat 409
Query: 361 ttgccaagtttggactcagagtgtgtgatatgtttgtcagagttcaccaatggtgaaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ttgccaagtttggactcagagtgtgtgatatgtttgtcagagttcaccaatggtgaaaag 469
Query: 421 gtgaggattttgcctaagtgtaaccacgggttccatgtgagatgcattgacaagtggcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gtgaggattttgcctaagtgtaaccacgggttccatgtgagatgcattgacaagtggcta 529
Query: 481 agctcacactcatcatgccccaagtgcagacagtgccttattgagacttgtgagaagatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 agctcacactcatcatgccccaagtgcagacagtgccttattgagacttgtgagaagatt 589
Query: 541 gttggggctactacctcatcatctcaacctcaactttctgttgttgtggtcacaccaaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 gttggggctactacctcatcatctcaacctcaactttctgttgttgtggtcacaccaaac 649
Query: 601 cttctggatccggtgctactagaaacagttgtgaccatagcaccactcgagccggagggc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 cttctggatccggtgctactagaaacagttgtgaccatagcaccactcgagccggagggc 709
Query: 661 atggtgcgtagctacaggggaattagctag 690
||||||||||||||||||||||||||||||
Sbjct: 710 atggtgcgtagctacaggggaattagctag 739
>gnl|LJGI|TC70057 similar to UniRef100_Q9LS98 Cluster: Similarity to RING zinc finger
protein; n=1; Arabidopsis thaliana|Rep: Similarity to
RING zinc finger protein - Arabidopsis thaliana
(Mouse-ear cress), partial (33%)
Length = 559
Score = 91.7 bits (46), Expect = 5e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 463 tgcattgacaagtggctaagctcacactcatcatgccccaagtgcagacagtgccttatt 522
||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| ||
Sbjct: 286 tgcattgacaagtggttgagttcacactcttcatgccccaagtgcagacagtgccttctt 345
Query: 523 gagact 528
||||||
Sbjct: 346 gagact 351
>gnl|LJGI|GO036106 similar to UniRef100_Q9LS98 Cluster: Similarity to RING zinc finger
protein; n=1; Arabidopsis thaliana|Rep: Similarity to
RING zinc finger protein - Arabidopsis thaliana
(Mouse-ear cress), partial (32%)
Length = 807
Score = 56.0 bits (28), Expect = 3e-07
Identities = 51/56 (91%), Gaps = 2/56 (3%)
Strand = Plus / Plus
Query: 463 tgcattgacaagtggctaagctcacactcatcatgccccaagtgcagacagtgcct 518
||||||||||||||| | || |||||||| |||||||| |||||||||||||||||
Sbjct: 721 tgcattgacaagtggttgag-tcacactcttcatgccc-aagtgcagacagtgcct 774
Score = 54.0 bits (27), Expect = 1e-06
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 175 gtcctgttgtgtgctcttatttgctcgctgggtttgaactccatcataaggtgtg 229
||||||||||||||||| || ||||| || || || ||||||||||| |||||||
Sbjct: 420 gtcctgttgtgtgctctgatctgctcacttggcttaaactccatcattaggtgtg 474