Miyakogusa Predicted Gene
- Lj1g3v0813940.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0813940.3 Non Chatacterized Hit- tr|D8QMS4|D8QMS4_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,43.85,3e-18,seg,NULL; Usp,UspA; Adenine nucleotide alpha
hydrolases-like,NULL; no description,Rossmann-like alph,CUFF.26374.3
(567 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79684 similar to UniRef100_A7NVC5 Cluster: Chromosome... 914 0.0
gnl|LJGI|TC81335 similar to UniRef100_A7NVC5 Cluster: Chromosome... 402 e-112
gnl|LJGI|TC62475 similar to UniRef100_A7NVC5 Cluster: Chromosome... 184 4e-46
gnl|LJGI|AV775403 homologue to UniRef100_A7NVC5 Cluster: Chromos... 94 1e-18
>gnl|LJGI|TC79684 similar to UniRef100_A7NVC5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 724
Score = 914 bits (461), Expect = 0.0
Identities = 491/500 (98%), Gaps = 2/500 (0%)
Strand = Plus / Plus
Query: 1 atgcccacttcagcttcatttttgagtgagcttagttcaaaggaagcttggaaatccaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 atgcccacttcagcttcatttttgagtgagcttagttcaaaggaagcttggaaatccaca 286
Query: 61 tctaacaggtggagtgcaaagaagagcagatatagcagcagtggttgtgaggcaagtctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tctaacaggtggagtgcaaagaagagcagatatagcagcagtggttgtgaggcaagtctg 346
Query: 121 agtcagatggaagggtttaacatgcagtatgggagtgaggactgtactggggtggtggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 agtcagatggaagggtttaacatgcagtatgggagtgaggactgtactggggtggtggtg 406
Query: 181 aggaagagagtcatggttgttgttgatggctcttcacattccaagcatgctatgttgtgg 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 aggaaaagagtcatggttgttgttgatggctcttcacattccaagcatgctatgttgtgg 466
Query: 241 gcactcacccatgttgttaacaagggtgacttgttgactctgcttcacataggctatgaa 300
|||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 467 gcactcacccatgttgttaacaagggtgacttgtcgactctgcttcacataggccatgaa 526
Query: 301 tcttcttcttgctccaattatcttctcaattattttgaatccctttgcaaagattgcaag 360
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 527 tcttcttcttgctccaattaccttctcaattattttgaatccctttgcaaagattgcaag 586
Query: 361 cctgaggtggaagtggaaccacttgtaatccaaggaccgaaactggccacagtgatgagc 420
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 cctgatgtggaagtggaaccacttgtaatccaaggaccgaaactggccacagtgatgagc 646
Query: 421 caggtgaagaagctggaggtctctgttctggtactaggccaaaagaagccatcttctctg 480
||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 647 caggtgaagaagctggaggtctctgttctggtactag--ccaaagaagccatcttctctg 704
Query: 481 ttaagctgtatttgtggaac 500
|||||||| |||||||||||
Sbjct: 705 ttaagctgcatttgtggaac 724
>gnl|LJGI|TC81335 similar to UniRef100_A7NVC5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 1056
Score = 402 bits (203), Expect = e-112
Identities = 203/203 (100%)
Strand = Plus / Plus
Query: 365 aggtggaagtggaaccacttgtaatccaaggaccgaaactggccacagtgatgagccagg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 aggtggaagtggaaccacttgtaatccaaggaccgaaactggccacagtgatgagccagg 667
Query: 425 tgaagaagctggaggtctctgttctggtactaggccaaaagaagccatcttctctgttaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 tgaagaagctggaggtctctgttctggtactaggccaaaagaagccatcttctctgttaa 727
Query: 485 gctgtatttgtggaaccagcaacagcagcacagaggagtttgtggagcattgcatcaata 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 gctgtatttgtggaaccagcaacagcagcacagaggagtttgtggagcattgcatcaata 787
Query: 545 atgcagagtgcttgacaattgga 567
|||||||||||||||||||||||
Sbjct: 788 atgcagagtgcttgacaattgga 810
Score = 293 bits (148), Expect = 6e-79
Identities = 158/160 (98%), Gaps = 1/160 (0%)
Strand = Plus / Plus
Query: 210 ctcttcacattccaagcatgctatgttgtgggcactcaccc-atgttgttaacaagggtg 268
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 25 ctcttcacattccaagcatgctatgttgtgggcactcaccccatgttgttaacaagggtg 84
Query: 269 acttgttgactctgcttcacataggctatgaatcttcttcttgctccaattatcttctca 328
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 85 acttgttgactctgcttcacatgggctatgaatcttcttcttgctccaattatcttctca 144
Query: 329 attattttgaatccctttgcaaagattgcaagcctgaggt 368
||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 attattttgaatccctttgcaaagattgcaagcctgaggt 184
>gnl|LJGI|TC62475 similar to UniRef100_A7NVC5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (70%)
Length = 738
Score = 184 bits (93), Expect = 4e-46
Identities = 135/149 (90%)
Strand = Plus / Plus
Query: 340 tccctttgcaaagattgcaagcctgaggtggaagtggaaccacttgtaatccaaggaccg 399
|||||||||| ||||| |||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 248 tccctttgcagagatttcaagcctgaggtggaagtggaagcacttgtaatccaaggccca 307
Query: 400 aaactggccacagtgatgagccaggtgaagaagctggaggtctctgttctggtactaggc 459
||| ||||||||||||||||||| ||||||||||||||||||||||| ||||| | |||
Sbjct: 308 aaattggccacagtgatgagccaagtgaagaagctggaggtctctgtcttggtattgggc 367
Query: 460 caaaagaagccatcttctctgttaagctg 488
|||||||||||||||| ||| || |||||
Sbjct: 368 caaaagaagccatcttatctcttcagctg 396
Score = 81.8 bits (41), Expect = 4e-15
Identities = 95/113 (84%)
Strand = Plus / Plus
Query: 175 gtggtgaggaagagagtcatggttgttgttgatggctcttcacattccaagcatgctatg 234
||||||| ||||||||| ||||| || || ||| | |||||||||||||||||||||||
Sbjct: 65 gtggtgaagaagagagtgatggtggtggtggatcacacttcacattccaagcatgctatg 124
Query: 235 ttgtgggcactcacccatgttgttaacaagggtgacttgttgactctgcttca 287
||||||| ||||| ||||| | || |||||||| ||| | |||||||||||
Sbjct: 125 atgtgggctctcactcatgtagcaaataagggtgatttgctcactctgcttca 177
>gnl|LJGI|AV775403 homologue to UniRef100_A7NVC5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 462
Score = 93.7 bits (47), Expect = 1e-18
Identities = 73/79 (92%), Gaps = 2/79 (2%)
Strand = Plus / Minus
Query: 491 tttgtggaaccagcaac-agcagcacagaggagtttgtggagcattgca-tcaataatgc 548
|||||||||||||| || |||||| |||||||||||||||||||||||| || |||||||
Sbjct: 334 tttgtggaaccagccaccagcagcccagaggagtttgtggagcattgcactccataatgc 275
Query: 549 agagtgcttgacaattgga 567
|||||||||||| ||||||
Sbjct: 274 agagtgcttgaccattgga 256