Miyakogusa Predicted Gene
- Lj1g3v0715520.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0715520.1 Non Chatacterized Hit- tr|I0YKX0|I0YKX0_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,36.8,3e-18,seg,NULL,CUFF.26201.1
(621 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59782 similar to UniRef100_A7R115 Cluster: Chromosome... 1231 0.0
gnl|LJGI|DC596899 similar to UniRef100_A7R115 Cluster: Chromosom... 684 0.0
gnl|LJGI|TC81997 similar to UniRef100_A7R115 Cluster: Chromosome... 147 1e-34
>gnl|LJGI|TC59782 similar to UniRef100_A7R115 Cluster: Chromosome chr4 scaffold_333,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_333, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (64%)
Length = 924
Score = 1231 bits (621), Expect = 0.0
Identities = 621/621 (100%)
Strand = Plus / Plus
Query: 1 atggcattcgctcacaatctactccctattcccgcaaaaccctcccctaagtgcccactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 atggcattcgctcacaatctactccctattcccgcaaaaccctcccctaagtgcccactt 127
Query: 61 ccttccatttcgaacccatcatgttcgatttcatcacacttcccctccagagctcaaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ccttccatttcgaacccatcatgttcgatttcatcacacttcccctccagagctcaaaat 187
Query: 121 cactcactagcatttaccacactccgcagaatcatcaatcacaaagctaaggctacacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 cactcactagcatttaccacactccgcagaatcatcaatcacaaagctaaggctacacca 247
Query: 181 caagaacctgaagtcagtgcaggtgcggccatcgatgcgttcacacaattcaagcatctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 caagaacctgaagtcagtgcaggtgcggccatcgatgcgttcacacaattcaagcatctg 307
Query: 241 cttttgcctattacagataggaatccctatctctcagagggaacaagacaggctatatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 cttttgcctattacagataggaatccctatctctcagagggaacaagacaggctatatct 367
Query: 301 actactactgctttagctaagaagtatggagctgacattacagttgtagttattgatgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 actactactgctttagctaagaagtatggagctgacattacagttgtagttattgatgaa 427
Query: 361 cagcagaaagagtcacttcctgagcatgagacccaactatccagcatccgttggcatata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 cagcagaaagagtcacttcctgagcatgagacccaactatccagcatccgttggcatata 487
Query: 421 tctgaaggtggatttaaggactacaacttgctagagcggctaggtgaagggagcaagcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tctgaaggtggatttaaggactacaacttgctagagcggctaggtgaagggagcaagcca 547
Query: 481 acagcaattattggtgacgttgctgatgaacttaatttggatttggtagttattagcatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 acagcaattattggtgacgttgctgatgaacttaatttggatttggtagttattagcatg 607
Query: 541 gaagcaattcatacaaagcatatagatgcaaatttgcttgctgagttcatcccctgtcct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gaagcaattcatacaaagcatatagatgcaaatttgcttgctgagttcatcccctgtcct 667
Query: 601 gtcatgcttttgccattgtaa 621
|||||||||||||||||||||
Sbjct: 668 gtcatgcttttgccattgtaa 688
>gnl|LJGI|DC596899 similar to UniRef100_A7R115 Cluster: Chromosome chr4 scaffold_333,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_333, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 576
Score = 684 bits (345), Expect = 0.0
Identities = 348/349 (99%)
Strand = Plus / Plus
Query: 1 atggcattcgctcacaatctactccctattcccgcaaaaccctcccctaagtgcccactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 atggcattcgctcacaatctactccctattcccgcaaaaccctcccctaagtgcccactt 71
Query: 61 ccttccatttcgaacccatcatgttcgatttcatcacacttcccctccagagctcaaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 ccttccatttcgaacccatcatgttcgatttcatcacacttcccctccagagctcaaaat 131
Query: 121 cactcactagcatttaccacactccgcagaatcatcaatcacaaagctaaggctacacca 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 cactcactagcttttaccacactccgcagaatcatcaatcacaaagctaaggctacacca 191
Query: 181 caagaacctgaagtcagtgcaggtgcggccatcgatgcgttcacacaattcaagcatctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 caagaacctgaagtcagtgcaggtgcggccatcgatgcgttcacacaattcaagcatctg 251
Query: 241 cttttgcctattacagataggaatccctatctctcagagggaacaagacaggctatatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 cttttgcctattacagataggaatccctatctctcagagggaacaagacaggctatatct 311
Query: 301 actactactgctttagctaagaagtatggagctgacattacagttgtag 349
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 actactactgctttagctaagaagtatggagctgacattacagttgtag 360
Score = 170 bits (86), Expect = 7e-42
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 344 ttgtagttattgatgaacagcagaaagagtcacttcctgagcatgagacccaactatcca 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ttgtagttattgatgaacagcagaaagagtcacttcctgagcatgagacccaactatcca 523
Query: 404 gcatccgttggcatatatctgaaggt 429
||||||||||||||||||||||||||
Sbjct: 524 gcatccgttggcatatatctgaaggt 549
>gnl|LJGI|TC81997 similar to UniRef100_A7R115 Cluster: Chromosome chr4 scaffold_333,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_333, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 537
Score = 147 bits (74), Expect = 1e-34
Identities = 125/141 (88%), Gaps = 7/141 (4%)
Strand = Plus / Plus
Query: 441 ctacaacttgctagagcggctaggtgaagggagcaagccaacagcaattattggtgacgt 500
||||| |||||||||||||||||||||||||||| |||| || || |||||| ||
Sbjct: 334 ctacaccttgctagagcggctaggtgaagggagcgagcccacggc------tggtgatgt 387
Query: 501 tgctgatgaacttaatttggatttggtagttattagca-tggaagcaattcatacaaagc 559
||||||||||||||||||||||||| |||||||||||| ||||| | ||||||||| |||
Sbjct: 388 tgctgatgaacttaatttggatttgatagttattagcactggaaacgattcatacacagc 447
Query: 560 atatagatgcaaatttgcttg 580
|||||||||||||||||||||
Sbjct: 448 atatagatgcaaatttgcttg 468