Miyakogusa Predicted Gene

Lj1g3v0270560.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0270560.1 tr|Q947K6|Q947K6_MEDSV CDK-activating kinase
OS=Medicago sativa subsp. varia GN=cak PE=2
SV=1,93.48,2e-16,PROTEIN_KINASE_ATP,Protein kinase, ATP binding site;
Protein kinase-like (PK-like),Protein
kinase-li,NODE_81686_length_292_cov_23.414383.path2.1
         (138 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS324216 homologue to UniRef100_Q947K6 Cluster: CDK-act...   274   1e-73
gnl|LJGI|FS336716 homologue to UniRef100_Q947K6 Cluster: CDK-act...   218   6e-57

>gnl|LJGI|FS324216 homologue to UniRef100_Q947K6 Cluster: CDK-activating kinase; n=1;
           Medicago sativa subsp. x varia|Rep: CDK-activating
           kinase - Medicago varia (Alfalfa), partial (42%)
          Length = 790

 Score =  274 bits (138), Expect = 1e-73
 Identities = 138/138 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcagaaaacgatccgtcgaagaaagtagccgataggtatctcaagcgtgaggtcctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 atggcagaaaacgatccgtcgaagaaagtagccgataggtatctcaagcgtgaggtcctt 337

                                                                       
Query: 61  ggtgaaggtacctatggtgtcgtctacaaagccattgatacccagacaggacaaacggtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ggtgaaggtacctatggtgtcgtctacaaagccattgatacccagacaggacaaacggtt 397

                             
Query: 121 gccattaaaaagattcgg 138
           ||||||||||||||||||
Sbjct: 398 gccattaaaaagattcgg 415


>gnl|LJGI|FS336716 homologue to UniRef100_Q947K6 Cluster: CDK-activating kinase; n=1;
           Medicago sativa subsp. x varia|Rep: CDK-activating
           kinase - Medicago varia (Alfalfa), partial (35%)
          Length = 739

 Score =  218 bits (110), Expect = 6e-57
 Identities = 131/138 (94%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcagaaaacgatccgtcgaagaaagtagccgataggtatctcaagcgtgaggtcctt 60
           ||||||||||||||||| || ||||||||||| ||||||||||||| |||||| ||||||
Sbjct: 304 atggcagaaaacgatccttccaagaaagtagctgataggtatctcaggcgtgaagtcctt 363

                                                                       
Query: 61  ggtgaaggtacctatggtgtcgtctacaaagccattgatacccagacaggacaaacggtt 120
           |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 364 ggtgaaggtacctatggtgttgtgtacaaagccattgatacccagacaggacaaacggtt 423

                             
Query: 121 gccattaaaaagattcgg 138
           ||||||||||||||||||
Sbjct: 424 gccattaaaaagattcgg 441