Miyakogusa Predicted Gene
- Lj1g3v0129840.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0129840.1 Non Chatacterized Hit- tr|D7TCR3|D7TCR3_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,54.67,0.000000000000001,RNA recognition motif,RNA recognition
motif domain; FAMILY NOT NAMED,NULL; no
description,Nucleotide,NODE_57968_length_468_cov_82.553421.path1.1
(258 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO036259 weakly similar to UniRef100_A7PP93 Cluster: Ch... 511 e-145
gnl|LJGI|TC82454 weakly similar to UniRef100_A7PP93 Cluster: Chr... 511 e-145
gnl|LJGI|TC66075 weakly similar to UniRef100_Q0JDC0 Cluster: Os0... 511 e-145
gnl|LJGI|TC62679 weakly similar to UniRef100_A7PP93 Cluster: Chr... 464 e-130
gnl|LJGI|FS337758 167 4e-41
>gnl|LJGI|GO036259 weakly similar to UniRef100_A7PP93 Cluster: Chromosome chr8
scaffold_23, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_23, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (49%)
Length = 772
Score = 511 bits (258), Expect = e-145
Identities = 258/258 (100%)
Strand = Plus / Plus
Query: 1 atgtctctctcaaaattgcagcatgcttcaccttctcaacttcccttcctccgaacaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 atgtctctctcaaaattgcagcatgcttcaccttctcaacttcccttcctccgaacaatg 332
Query: 61 acttctaagatttttgttaagggtttagcattttctactacagaggataaattagctgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 acttctaagatttttgttaagggtttagcattttctactacagaggataaattagctgaa 392
Query: 121 gctttttctcaatacggcaaagtcctgaaagctgatatagtcttgaatagagctaaaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gctttttctcaatacggcaaagtcctgaaagctgatatagtcttgaatagagctaaaact 452
Query: 181 agatccaaaggttttgggtatgtgacttttgctaaggaggaagatgctcagaaggcacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 agatccaaaggttttgggtatgtgacttttgctaaggaggaagatgctcagaaggcacag 512
Query: 241 attggcatgaatagaaaa 258
||||||||||||||||||
Sbjct: 513 attggcatgaatagaaaa 530
>gnl|LJGI|TC82454 weakly similar to UniRef100_A7PP93 Cluster: Chromosome chr8
scaffold_23, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_23, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (49%)
Length = 1057
Score = 511 bits (258), Expect = e-145
Identities = 258/258 (100%)
Strand = Plus / Plus
Query: 1 atgtctctctcaaaattgcagcatgcttcaccttctcaacttcccttcctccgaacaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 atgtctctctcaaaattgcagcatgcttcaccttctcaacttcccttcctccgaacaatg 417
Query: 61 acttctaagatttttgttaagggtttagcattttctactacagaggataaattagctgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 acttctaagatttttgttaagggtttagcattttctactacagaggataaattagctgaa 477
Query: 121 gctttttctcaatacggcaaagtcctgaaagctgatatagtcttgaatagagctaaaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gctttttctcaatacggcaaagtcctgaaagctgatatagtcttgaatagagctaaaact 537
Query: 181 agatccaaaggttttgggtatgtgacttttgctaaggaggaagatgctcagaaggcacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 agatccaaaggttttgggtatgtgacttttgctaaggaggaagatgctcagaaggcacag 597
Query: 241 attggcatgaatagaaaa 258
||||||||||||||||||
Sbjct: 598 attggcatgaatagaaaa 615
>gnl|LJGI|TC66075 weakly similar to UniRef100_Q0JDC0 Cluster: Os04g0414300 protein;
n=1; Oryza sativa Japonica Group|Rep: Os04g0414300
protein - Oryza sativa subsp. japonica (Rice), partial
(13%)
Length = 1219
Score = 511 bits (258), Expect = e-145
Identities = 258/258 (100%)
Strand = Plus / Plus
Query: 1 atgtctctctcaaaattgcagcatgcttcaccttctcaacttcccttcctccgaacaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 atgtctctctcaaaattgcagcatgcttcaccttctcaacttcccttcctccgaacaatg 664
Query: 61 acttctaagatttttgttaagggtttagcattttctactacagaggataaattagctgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 acttctaagatttttgttaagggtttagcattttctactacagaggataaattagctgaa 724
Query: 121 gctttttctcaatacggcaaagtcctgaaagctgatatagtcttgaatagagctaaaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 gctttttctcaatacggcaaagtcctgaaagctgatatagtcttgaatagagctaaaact 784
Query: 181 agatccaaaggttttgggtatgtgacttttgctaaggaggaagatgctcagaaggcacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 agatccaaaggttttgggtatgtgacttttgctaaggaggaagatgctcagaaggcacag 844
Query: 241 attggcatgaatagaaaa 258
||||||||||||||||||
Sbjct: 845 attggcatgaatagaaaa 862
>gnl|LJGI|TC62679 weakly similar to UniRef100_A7PP93 Cluster: Chromosome chr8
scaffold_23, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_23, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (49%)
Length = 710
Score = 464 bits (234), Expect = e-130
Identities = 237/238 (99%)
Strand = Plus / Plus
Query: 21 gcatgcttcaccttctcaacttcccttcctccgaacaatgacttctaagatttttgttaa 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gcatgcttcaccttctcaacttcccttcctccgaacaatgacttctaagatttttgttaa 303
Query: 81 gggtttagcattttctactacagaggataaattagctgaagctttttctcaatacggcaa 140
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gggtttaacattttctactacagaggataaattagctgaagctttttctcaatacggcaa 363
Query: 141 agtcctgaaagctgatatagtcttgaatagagctaaaactagatccaaaggttttgggta 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 agtcctgaaagctgatatagtcttgaatagagctaaaactagatccaaaggttttgggta 423
Query: 201 tgtgacttttgctaaggaggaagatgctcagaaggcacagattggcatgaatagaaaa 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tgtgacttttgctaaggaggaagatgctcagaaggcacagattggcatgaatagaaaa 481
>gnl|LJGI|FS337758
Length = 707
Score = 167 bits (84), Expect = 4e-41
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 1 atgtctctctcaaaattgcagcatgcttcaccttctcaacttcccttcctccgaacaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 atgtctctctcaaaattgcagcatgcttcaccttctcaacttcccttcctccgaacaatg 395
Query: 61 acttctaagatttttgttaagggt 84
||||||||||||||||||||||||
Sbjct: 396 acttctaagatttttgttaagggt 419