Miyakogusa Predicted Gene
- Lj1g3v0116380.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0116380.1 Non Chatacterized Hit- tr|I1JAQ4|I1JAQ4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.29599 PE,78.47,0,no
description,NULL; AAA_12,NULL; AAA_11,NULL; HELICASE
MOV-10-RELATED,Probable RNA helicase SDE3; D,CUFF.25245.1
(2622 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61361 weakly similar to UniRef100_Q8GYD9 Cluster: Pro... 1201 0.0
gnl|LJGI|GO005055 similar to UniRef100_Q8GYD9 Cluster: Probable ... 1191 0.0
gnl|LJGI|TC65478 similar to UniRef100_A7NWR2 Cluster: Chromosome... 835 0.0
gnl|LJGI|BP043085 similar to UniRef100_A7NWR2 Cluster: Chromosom... 545 e-154
>gnl|LJGI|TC61361 weakly similar to UniRef100_Q8GYD9 Cluster: Probable RNA helicase
SDE3; n=1; Arabidopsis thaliana|Rep: Probable RNA
helicase SDE3 - Arabidopsis thaliana (Mouse-ear cress),
partial (14%)
Length = 774
Score = 1201 bits (606), Expect = 0.0
Identities = 606/606 (100%)
Strand = Plus / Plus
Query: 1 atgagtaccgccggatacaaatcagacggggagtgctctgtcataagctccaaggctgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 atgagtaccgccggatacaaatcagacggggagtgctctgtcataagctccaaggctgaa 228
Query: 61 attccgtttctcgattttgaggaagagaaatctgtttgcagttacttggccactgaagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 attccgtttctcgattttgaggaagagaaatctgtttgcagttacttggccactgaagag 288
Query: 121 gatcccgtaatcgtatccattccgtttgcatttgtgcaggggaagccgaaatcagtaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gatcccgtaatcgtatccattccgtttgcatttgtgcaggggaagccgaaatcagtaact 348
Query: 181 gttggagaaactgctgtggatttggtaaccattaataacactactgatgaacctgtgcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 gttggagaaactgctgtggatttggtaaccattaataacactactgatgaacctgtgcag 408
Query: 241 ctgtggagtgttcatatttttgcctcaaatcctacggactctttcactctttctctcatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ctgtggagtgttcatatttttgcctcaaatcctacggactctttcactctttctctcatg 468
Query: 301 gaacctccgtcagtgaagtcgaatgcagatagcgatgagagctttttagaattttgcact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gaacctccgtcagtgaagtcgaatgcagatagcgatgagagctttttagaattttgcact 528
Query: 361 ctggaggacaggatgctccagcctcgcgaggtcctaaagatatggttgtcttgcaagaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ctggaggacaggatgctccagcctcgcgaggtcctaaagatatggttgtcttgcaagaca 588
Query: 421 aaagaaataggcatgtactcatcagttgtgtattttgatattggagatgaaaaaatagaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 aaagaaataggcatgtactcatcagttgtgtattttgatattggagatgaaaaaatagaa 648
Query: 481 agggtggttttcctcttagttgaagacaagatctccaagtctttgacttctaacaggccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 agggtggttttcctcttagttgaagacaagatctccaagtctttgacttctaacaggccc 708
Query: 541 tatgcaaaaggaaggagaaaagacaaattggtcgtagatacttttgttcctggctcacgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 tatgcaaaaggaaggagaaaagacaaattggtcgtagatacttttgttcctggctcacgt 768
Query: 601 cctgca 606
||||||
Sbjct: 769 cctgca 774
>gnl|LJGI|GO005055 similar to UniRef100_Q8GYD9 Cluster: Probable RNA helicase SDE3; n=1;
Arabidopsis thaliana|Rep: Probable RNA helicase SDE3 -
Arabidopsis thaliana (Mouse-ear cress), partial (17%)
Length = 619
Score = 1191 bits (601), Expect = 0.0
Identities = 616/620 (99%), Gaps = 2/620 (0%)
Strand = Plus / Plus
Query: 807 aggcataactttgagaaagagaggcaaccattttttgtccttggaggttcctgggcttgc 866
|||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 2 aggcataactttgagaaagagaggcaaccaattt--gtccttggaggttcctgggcttgc 59
Query: 867 tgagagaagaccatcacttgttcacggggattttatctatgccacgccggcgtctgaaca 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 tgagagaagaccatcacttgttcacggggattttatctatgccacgccggcgtctgaaca 119
Query: 927 caatgcaaacaaagctcgcatctatcagggatatatccaccgggttgaagctgatgaggt 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 caatgcaaacaaagctcgcatctatcagggatatatccaccgggttgaagctgatgaggt 179
Query: 987 ctatttgaagtttgatcctgaatttcactttatgcatagaaatgagaatctttatgatgt 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ctatttgaagtttgatcctgaatttcactttatgcatagaaatgagaatctttatgatgt 239
Query: 1047 tcacttcacgtataataggctcaatatgagaagagaatatcaagcagttgaggcagcaga 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tcacttcacgtataataggctcaatatgagaagagaatatcaagcagttgaggcagcaga 299
Query: 1107 aaccttaggtcctgacttcattttcccctccaaatcatccagaaggaggcacattaaaac 1166
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 300 aaccttaggtcctgacttcattttcccctccaaatcatccagaaggaggcacactaaaac 359
Query: 1167 cacagatctggttcccatatctggtacttttaatgaggagcaagtttgttcaatcaaaat 1226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 cacagatctggttcccatatctggtacttttaatgaggagcaagtttgttcaatcaaaat 419
Query: 1227 gattctgggttgcaaaggtgcaccaccatatgtgattcatggacctccaggtacgggaaa 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gattctgggttgcaaaggtgcaccaccatatgtgattcatggacctccaggtacgggaaa 479
Query: 1287 gactaggacaatagtagaagcaatccttcagctctacacacatcaaaaggatgctcgtat 1346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gactaggacaatagtagaagcaatccttcagctctacacacatcaaaaggatgctcgtat 539
Query: 1347 tcttgtgtgtgctgcctcaaatagtgcagcagactatgtactggaaaaactacttgctca 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tcttgtgtgtgctgcctcaaatagtgcagcagactatgtactggaaaaactacttgctca 599
Query: 1407 acaggatgttgaatttcgtg 1426
||||||||||||||||||||
Sbjct: 600 acaggatgttgaatttcgtg 619
>gnl|LJGI|TC65478 similar to UniRef100_A7NWR2 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (12%)
Length = 900
Score = 835 bits (421), Expect = 0.0
Identities = 421/421 (100%)
Strand = Plus / Plus
Query: 2202 tatcaaagttggtagtgttgagcaatttcagggacaagaaaaggaggtgataatcatatc 2261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatcaaagttggtagtgttgagcaatttcagggacaagaaaaggaggtgataatcatatc 60
Query: 2262 aactgttcgatcaaccatcaagcacaatgagattgacagagtccactgtcttggcttctt 2321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aactgttcgatcaaccatcaagcacaatgagattgacagagtccactgtcttggcttctt 120
Query: 2322 gagcaattttagaaggtttaatgtggctgtaacccgtgctatctcattactggttataat 2381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagcaattttagaaggtttaatgtggctgtaacccgtgctatctcattactggttataat 180
Query: 2382 tgggaatccccatattatatgcaaggatgaaaattggggccaaatgttgtggcactgtgt 2441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgggaatccccatattatatgcaaggatgaaaattggggccaaatgttgtggcactgtgt 240
Query: 2442 ggacaattcatcttatcagggttgtgctcttcctgaaaggccggcggcaccttgtgataa 2501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggacaattcatcttatcagggttgtgctcttcctgaaaggccggcggcaccttgtgataa 300
Query: 2502 tgagtacaatggggagaactcttgcttaacctataatgatgataatgcattaccctctaa 2561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgagtacaatggggagaactcttgcttaacctataatgatgataatgcattaccctctaa 360
Query: 2562 caatggaggatgggatcaaccctctaacaatggagaatgggatcaaccctctaacaatgg 2621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caatggaggatgggatcaaccctctaacaatggagaatgggatcaaccctctaacaatgg 420
Query: 2622 a 2622
|
Sbjct: 421 a 421
Score = 131 bits (66), Expect = 2e-29
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 2553 accctctaacaatggaggatgggatcaaccctctaacaatggagaatgggatcaaccctc 2612
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 accctctaacaatggagaatgggatcaaccctctaacaatggagaatgggatcaaccctc 438
Query: 2613 taacaatgga 2622
||||||||||
Sbjct: 439 taacaatgga 448
Score = 93.7 bits (47), Expect = 5e-18
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 2553 accctctaacaatggaggatgggatcaaccctctaacaatggagaatgggatcaa 2607
||||||||||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 406 accctctaacaatggagaatgggatcaaccctctaacaatggacaatgggatcaa 460
>gnl|LJGI|BP043085 similar to UniRef100_A7NWR2 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (10%)
Length = 466
Score = 545 bits (275), Expect = e-154
Identities = 275/275 (100%)
Strand = Plus / Minus
Query: 2133 cataataacgccatacaagcaacaagtgctgaaaataaaacagacacttgaaaatgaagg 2192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 cataataacgccatacaagcaacaagtgctgaaaataaaacagacacttgaaaatgaagg 407
Query: 2193 gatgccggatatcaaagttggtagtgttgagcaatttcagggacaagaaaaggaggtgat 2252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gatgccggatatcaaagttggtagtgttgagcaatttcagggacaagaaaaggaggtgat 347
Query: 2253 aatcatatcaactgttcgatcaaccatcaagcacaatgagattgacagagtccactgtct 2312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 aatcatatcaactgttcgatcaaccatcaagcacaatgagattgacagagtccactgtct 287
Query: 2313 tggcttcttgagcaattttagaaggtttaatgtggctgtaacccgtgctatctcattact 2372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 tggcttcttgagcaattttagaaggtttaatgtggctgtaacccgtgctatctcattact 227
Query: 2373 ggttataattgggaatccccatattatatgcaagg 2407
|||||||||||||||||||||||||||||||||||
Sbjct: 226 ggttataattgggaatccccatattatatgcaagg 192