Miyakogusa Predicted Gene
- Lj0g3v0362779.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0362779.1 Non Chatacterized Hit- tr|K4B203|K4B203_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,32.68,2e-18,ELO,GNS1/SUR4 membrane protein; FATTY ACID ACYL
TRANSFERASE-RELATED,GNS1/SUR4 membrane protein; seg,,CUFF.24985.1
(619 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57589 similar to UniRef100_A7NTI8 Cluster: Chromosome... 1148 0.0
gnl|LJGI|FS318636 similar to UniRef100_A7NTI8 Cluster: Chromosom... 172 2e-42
gnl|LJGI|TC69715 similar to UniRef100_A7NTI8 Cluster: Chromosome... 155 4e-37
gnl|LJGI|TC71965 similar to UniRef100_A7NTI8 Cluster: Chromosome... 86 3e-16
gnl|LJGI|TC71628 weakly similar to UniRef100_A7PV13 Cluster: Chr... 68 7e-11
>gnl|LJGI|TC57589 similar to UniRef100_A7NTI8 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (86%)
Length = 1276
Score = 1148 bits (579), Expect = 0.0
Identities = 609/619 (98%)
Strand = Plus / Plus
Query: 1 atgtccctcatctccgccgctattttcaccggaacactcgcctccgccgccgccgagatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 atgtccctcatctccgccgctattttcaccggaacactcgcctccgccgccgccgagatc 472
Query: 61 cgcgacacgcgctggttctggcgccgctccaaaaccccttttgaatggctcctctgtttt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 cgcgacacgcgctggttctggcgccgctccaaaaccccttttgaatggctcctctgtttc 532
Query: 121 cccctcggaacccgaccctccgggcgcgtgttcttctggtcctacctctactacctctcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 cccctcggaacccgaccctccgggcgcgtgttcttctggtcctacctctactacctctcg 592
Query: 181 cggttcctccacatggcgaggaccgtgttctgcatcctccgccgccgtagattatcattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 cggttcctccacatggcgaggaccgtgttctgcatcctccgccgccgtagattatcattt 652
Query: 241 tcccagctcttcaaccactcaatctccaccttcgtctcgttcctctggctcgagtactcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 tcccagctcttcaaccactcaatctccaccttcgtctcgttcctctggctcgagtactcg 712
Query: 301 cagtcgtttcaggtgctggcgattctcttcaccacgctcgtgtacgcgcttgtgtatggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 cagtcgtttcaggtgctggcgattctcttcaccacgctcgtgtacgcgcttgtgtatggg 772
Query: 361 tacaggttcgggactgcgattgggtttcgcggcgcgtgctttccgtttgtgttgaactgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 tacaggttcgggactgcgattgggtttcgcggcgcgtgctttccgtttgtgttgaactgc 832
Query: 421 cagattgtgttgctgggttgtaacgtggcgtgccatgttggggtttttctgctgcatttc 480
|| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 833 caaattgtgttgctgggttgtaacgtggcgtcccatgttggggtttttctgctgcatttc 892
Query: 481 ttcttcaaaggtgggtgcaatgggattggcgcgtgggtgttcaactctgttctcaacact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893 ttcttcaaaggtgggtgcaatgggattggcgcgtgggtgttcaactctgttctcaacact 952
Query: 541 gttgtgctgttgctgtttctcaatttctatgtgaggatgtatgtttttggtaagaggaga 600
|||| || |||||||||||||||||||||||| || ||||||||||||||||| || | |
Sbjct: 953 gttgggcggttgctgtttctcaatttctatgtaagaatgtatgtttttggtaaaagaaaa 1012
Query: 601 aaggttgagtgtgggtgag 619
|||||||||||||||||||
Sbjct: 1013 aaggttgagtgtgggtgag 1031
>gnl|LJGI|FS318636 similar to UniRef100_A7NTI8 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (72%)
Length = 849
Score = 172 bits (87), Expect = 2e-42
Identities = 228/275 (82%)
Strand = Plus / Plus
Query: 73 tggttctggcgccgctccaaaaccccttttgaatggctcctctgttttcccctcggaacc 132
|||||||||||||| || ||||||||| | | |||||||||||||| || ||||| ||
Sbjct: 433 tggttctggcgccggtcaaaaacccctctccagtggctcctctgtttccctctcggtaca 492
Query: 133 cgaccctccgggcgcgtgttcttctggtcctacctctactacctctcgcggttcctccac 192
|| |||||||| || || ||||||||||||||| ||| |||||||||||| ||||| |||
Sbjct: 493 cgcccctccggccgagtcttcttctggtcctacgtcttctacctctcgcgcttccttcac 552
Query: 193 atggcgaggaccgtgttctgcatcctccgccgccgtagattatcattttcccagctcttc 252
||| ||||||||| ||| |||||| || || |||| | || | ||||||||||
Sbjct: 553 atgttgaggaccgtcttcgtcatcctacgacgtcgtaagctcgtgttcttccagctcttc 612
Query: 253 aaccactcaatctccaccttcgtctcgttcctctggctcgagtactcgcagtcgtttcag 312
|||||||||||||| ||||| |||||||||||||| || ||||||||||||||||||
Sbjct: 613 taccactcaatctccgccttcacgtcgttcctctggctggaatactcgcagtcgtttcag 672
Query: 313 gtgctggcgattctcttcaccacgctcgtgtacgc 347
|||||||| ||||| ||||| ||||| | ||||||
Sbjct: 673 gtgctggccattctgttcacaacgctggcgtacgc 707
>gnl|LJGI|TC69715 similar to UniRef100_A7NTI8 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 802
Score = 155 bits (78), Expect = 4e-37
Identities = 383/483 (79%), Gaps = 10/483 (2%)
Strand = Plus / Plus
Query: 106 tggctcctctgttttcccctcggaacccgaccctccgggcgcgtgttcttctggtcctac 165
||||||||| |||| || ||||| || || |||||||| || || |||||||||||||||
Sbjct: 14 tggctcctc-gtttccctctcggtacacgcccctccggccgagtcttcttctggtcctac 72
Query: 166 ctctactacctctcgcggttcctccacatggcgaggaccgtgttctgcatcctccgccgc 225
||| |||||||||||| ||||| |||||| ||||||||| ||| |||||| || ||
Sbjct: 73 gtcttctacctctcgcgcttccttcacatgttgaggaccgtcttcgtcatcctacgacgt 132
Query: 226 cgtagattatcattttcccagctcttcaaccactcaatctccaccttcgtctcgttcctc 285
|||| | || | |||| ||||| |||||||||||||| ||||| |||||||||
Sbjct: 133 cgtaagctcgtgttcttccaggtcttctaccactcaatctccgccttcacgtcgttcctc 192
Query: 286 tggctcgagtactcgcagtcgtttcaggtgctggcgattctcttcaccacgctcgtgtac 345
||||| || |||||||||||||||||||||||||| ||||| ||||| ||||| | ||||
Sbjct: 193 tggctggaatactcgcagtcgtttcaggtgctggccattctgttcacaacgctggcgtac 252
Query: 346 gcgcttgtgtatgggtacaggttcgggactgcgattgggt------ttcgcggcgcgtgc 399
|| | |||| || ||| |||| |||| || | |||| || |||||||||
Sbjct: 253 gccgtcatgtacggttaccggttttggaccgccgtcgggtcgtcggcgcgtggcgcgtgc 312
Query: 400 tttccgtttgtgttgaactgccagattgtgttgctgggttgtaacgtggcgtgccatgtt 459
|| ||| |||||||||| |||||| | | | || |||| || || ||| ||||||||||
Sbjct: 313 ttcccgcttgtgttgaattgccaggtggcgctgttggggtgcaatctggtgtgccatgtt 372
Query: 460 ggggtttttctgctgcatttcttcttcaaaggtgggtgcaatgggattggcgcgtgggtg 519
||||| ||||| ||||| ||||| ||||||||||||||||||||||| || ||||||
Sbjct: 373 ggggtgcttctgatgcat---ttctttaaaggtgggtgcaatgggattggtgcttgggtg 429
Query: 520 ttcaactctgttctcaacactgttgtgctgttgctgtttctcaatttctatgtgaggatg 579
|||| ||||| || ||| || || |||| |||||||||||||| ||||||||| ||
Sbjct: 430 ctcaattctgtgctgaacggtgccgttttgtttctgtttctcaatttttatgtgaggttg 489
Query: 580 tat 582
|||
Sbjct: 490 tat 492
>gnl|LJGI|TC71965 similar to UniRef100_A7NTI8 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (63%)
Length = 771
Score = 85.7 bits (43), Expect = 3e-16
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 110 tcctctgttttcccctcggaacccgaccctccgggcgcgtgttcttctggtcctacctct 169
|||||||||| || ||||| ||||| |||||||| || || ||||||||||||||| |||
Sbjct: 454 tcctctgtttcccactcgggacccgcccctccggccgtgtcttcttctggtcctacatct 513
Query: 170 actacctctcgcggttcctccac 192
||||||||| ||||||||||||
Sbjct: 514 tctacctctcacggttcctccac 536
>gnl|LJGI|TC71628 weakly similar to UniRef100_A7PV13 Cluster: Chromosome chr4
scaffold_32, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_32, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (47%)
Length = 594
Score = 67.9 bits (34), Expect = 7e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 134 gaccctccgggcgcgtgttcttctggtcctacctctactacctctcgcggttcctccaca 193
|||||||||| || || ||||||||||||||| ||| ||||||||| || ||||||||||
Sbjct: 498 gaccctccggccgtgtcttcttctggtcctacatcttctacctctcccgcttcctccaca 557
Query: 194 tg 195
||
Sbjct: 558 tg 559