Miyakogusa Predicted Gene
- Lj0g3v0360189.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0360189.1 Non Chatacterized Hit- tr|F1Q514|F1Q514_DANRE
Uncharacterized protein OS=Danio rerio GN=zgc:123272
P,28.99,1e-18,seg,NULL; coiled-coil,NULL; Morph_protein1,Exonuclease
V; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,CUFF.24916.1
(1125 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64877 similar to UniRef100_A7NZF0 Cluster: Chromosome... 2097 0.0
gnl|LJGI|BP058793 161 1e-38
>gnl|LJGI|TC64877 similar to UniRef100_A7NZF0 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (55%)
Length = 1653
Score = 2097 bits (1058), Expect = 0.0
Identities = 1104/1125 (98%)
Strand = Plus / Plus
Query: 1 atggccgaaacttcctcagaccacactcctcatatacccatcgaaatcatcactgacgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 atggccgaaacttcctcagaccacactcctcatatacccatcgaaatcatcactgacgac 192
Query: 61 gaaatggctctcattgaagctgctttcgctttcgcttccgcttccgctcgttctgctttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gaaatggctctcattgaagctgctttcgctttcgcttccgcttccgctcgttctgctttt 252
Query: 121 cgttcatcaacaccgnnnnnnnnnnnnnnnnncctttctcctccttcttcttcttcccct 180
||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 253 cgttcatcaacaccgccaccaccaccaccacccctttctcctccttcttcttcttcccct 312
Query: 181 ctctttcgctccaatgcactctccatcaaatccatcacagttctatccaagcgaagcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ctctttcgctccaatgcactctccatcaaatccatcacagttctatccaagcgaagcttc 372
Query: 241 tcacacgccactggcagtggaacgagtacccaccaccctgacattgaggattcttcgccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tcacacgccactggcagtggaacgagtacccaccaccctgacattgaggattcttcgccc 432
Query: 301 aaattgaaaacccttcttcctgattcctttctccaccgtttcaggaagaatcgtggcttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aaattgaaaacccttcttcctgattcctttctccaccgtttcaggaagaatcgtggcttg 492
Query: 361 tctgtcactgatatcacatctacggaatggtgttcaaagcaaatggaatttgctctcact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tctgtcactgatatcacatctacggaatggtgttcaaagcaaatggaatttgctctcact 552
Query: 421 cttggagggaggaagaccaatcaagttatgagagctggcattgcccggcatgcgaaactt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 cttggagggaggaagaccaatcaagttatgagagctggcattgcccggcatgcgaaactt 612
Query: 481 gaagaagaggttataaaacgggtggaagtaaatatcaaatcaaaagaagatcagtgggcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gaagaagaggttataaaacgggtggaagtaaatatcaaatcaaaagaagatcagtgggcc 672
Query: 541 ctgaagtttcttaattttattaatggtgtgaatcaactattctttgaaggattaactcgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 ctgaagtttcttaattttattaatggtgtgaatcaactattctttgaaggattaactcgt 732
Query: 601 gaactgccaataatgggctttgcagaagatacatggatagtaggagtgattgatgagatt 660
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 gaactaccaataatgggctttgcagaagatacatggatagtaggagtgattgatgagatt 792
Query: 661 cggatgccatcaacagaaaatgatcataatccgatactaattgacacaaagacacgtgct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 cggatgccatcaacagaaaatgatcataatccgatactaattgacacaaagacacgtgct 852
Query: 721 cgtgatactctaccttctgaaccacagcgaagaaatggaaggcttcaattaatgtgttac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 cgtgatactctaccttctgaaccacagcgaagaaatggaaggcttcaattaatgtgttac 912
Query: 781 aagtatttgtgggacagtttactcgctgatgatttcccttctgaaaagttttttactaaa 840
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 913 aagtatttgtgggacagtttagtcgctgatgatttcccttctgaaaagttttttactaat 972
Query: 841 tttggcttataccctgaacaaactctgtgtgaagatctgaaagtgaaaagttctgacccc 900
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 973 tttggcttaaaccctgaacaaactctgtgtgaagatctgaaagtgaaaagttctgacccc 1032
Query: 901 aaatattctgcattgacccttgatgatgtggtgagatattacaaaaatacatgtagcatg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1033 aaatattctgcattgacccttgatgatgtggtgagatattacaaaaatacatgtagcatg 1092
Query: 961 ctgctccctgctcacgatcagcttttattgagatatgaatatcagaaggatcattcgctg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1093 ctgctccctgctcacgatcagcttttattgagatatgaatatcagaaggatcattcgctg 1152
Query: 1021 atcggtgaagataaatttgcatatgattccgagtggctaaaaagtcaaatgcatcgttgt 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1153 atcggtgaagataaatttgcatatgattccgagtggctaaaaagtcaaatgcatcgttgt 1212
Query: 1081 attgaggtttggcttggaaagcgagaaaccacttatgttcctgag 1125
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1213 attgaggtttggcttggaaagcgagaaaccacttatgttcctgag 1257
>gnl|LJGI|BP058793
Length = 223
Score = 161 bits (81), Expect = 1e-38
Identities = 95/97 (97%), Gaps = 2/97 (2%)
Strand = Plus / Plus
Query: 1 atggccgaaacttcctcagaccacactcctcatatacccatcgaaatcatcactgacgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 atggccgaaacttcctcagaccacactcctcatatacccatcgaaatcatcactgacgac 125
Query: 61 gaaatggctctcattga-agctgcttt-cgctttcgc 95
||||||||||||||||| ||||||||| |||||||||
Sbjct: 126 gaaatggctctcattgacagctgctttccgctttcgc 162