Miyakogusa Predicted Gene

Lj0g3v0358989.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0358989.1 Non Chatacterized Hit- tr|K3XS75|K3XS75_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si004772,25.59,0.0000000000002,seg,NULL;
coiled-coil,NULL,CUFF.24696.1
         (1794 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AW719204 similar to UniRef100_A7PAH2 Cluster: Chromosom...   172   5e-42

>gnl|LJGI|AW719204 similar to UniRef100_A7PAH2 Cluster: Chromosome chr14 scaffold_9,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr14 scaffold_9, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (16%)
          Length = 544

 Score =  172 bits (87), Expect = 5e-42
 Identities = 183/215 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1386 agtagcatctgcggaagctggtcaggagaagcaaagtatgttgtattccacaattagtga 1445
            |||||||||||| |||||| ||||||||||||| |  ||||||||||||||||||  |||
Sbjct: 308  agtagcatctgctgaagctagtcaggagaagcagaagatgttgtattccacaattgatga 367

                                                                        
Query: 1446 tatggaaaatgtgataaaggatcttaagtcaaaggtttctaaagctgagagtcaggctga 1505
            |||| |  |||||||  ||||||||||||||||  |||||||||||||||||| ||||||
Sbjct: 368  tatgaatcatgtgatggaggatcttaagtcaaatttttctaaagctgagagtcgggctga 427

                                                                        
Query: 1506 cagtgcagaggagaattgtataatattgtctgaatctaatgctaagttaaatgaggaact 1565
             || || |||||||| ||||| ||||| || ||||| |||||  | |||||||||||| |
Sbjct: 428  tagcgctgaggagaagtgtatcatattatccgaatcaaatgccgatttaaatgaggaaat 487

                                               
Query: 1566 gaagttcttggggagtagattggaatgcttagagg 1600
             || |||||| ||||||||||||| ||||| ||||
Sbjct: 488  aaacttcttgaggagtagattggagtgcttggagg 522