Miyakogusa Predicted Gene

Lj0g3v0349259.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0349259.1 Non Chatacterized Hit- tr|I1M579|I1M579_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,60.26,0.00000000000009, ,CUFF.23986.1
         (183 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV406744 weakly similar to UniRef100_A7QAL8 Cluster: Ch...   167   3e-41

>gnl|LJGI|AV406744 weakly similar to UniRef100_A7QAL8 Cluster: Chromosome chr5
           scaffold_72, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr5 scaffold_72, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (34%)
          Length = 424

 Score =  167 bits (84), Expect = 3e-41
 Identities = 90/92 (97%)
 Strand = Plus / Plus

                                                                       
Query: 73  ggactaaagtatgagggagttcaaggccttctaggtataattcatactacggggacagtt 132
           ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 333 ggactaaagtatgagggtgttcaaggccttctaggtataattcatactagggggacagtt 392

                                           
Query: 133 cctaatgcacttccaccaccaagatcatctct 164
           ||||||||||||||||||||||||||||||||
Sbjct: 393 cctaatgcacttccaccaccaagatcatctct 424



 Score =  117 bits (59), Expect = 2e-26
 Identities = 59/59 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1   atgttggaggcagaaagccttgaaaaagttcttccaggagttgaaagtgttgaagaagg 59
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 atgttggaggcagaaagccttgaaaaagttcttccaggagttgaaagtgttgaagaagg 214