Miyakogusa Predicted Gene

Lj0g3v0341769.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0341769.1 tr|G7KGI3|G7KGI3_MEDTR NBS resistance protein
OS=Medicago truncatula GN=MTR_5g031270 PE=4
SV=1,62.34,0.000000000000007,DUF707,Protein of unknown function
DUF707,CUFF.23417.1
         (231 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76459 similar to UniRef100_A7QCA1 Cluster: Chromosome...    90   7e-18
gnl|LJGI|DC596318                                                      84   4e-16
gnl|LJGI|TC70355 weakly similar to UniRef100_A7PQ15 Cluster: Chr...    50   6e-06

>gnl|LJGI|TC76459 similar to UniRef100_A7QCA1 Cluster: Chromosome undetermined
           scaffold_77, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_77, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (30%)
          Length = 833

 Score = 89.7 bits (45), Expect = 7e-18
 Identities = 108/129 (83%)
 Strand = Plus / Plus

                                                                       
Query: 87  tgctagagcatcaaacttggaattgcgacccttatgggactctggcataaataagcgaat 146
           ||||||| |||| | ||| ||| |||| ||||||||||||||||| |||||| |  ||||
Sbjct: 282 tgctagaacatctagcttcgaaatgcggcccttatgggactctggtataaatcatagaat 341

                                                                       
Query: 147 ttcaaagcacccattgaacttgcttcctactgcagtaggagtgaagaagaaagagattat 206
           |||||||||||||||||||||| |  ||| |||||| ||  | ||| ||||||| ||| |
Sbjct: 342 ttcaaagcacccattgaacttgttggctattgcagtggggataaagcagaaagaaattgt 401

                    
Query: 207 caataaaat 215
           |||||||||
Sbjct: 402 caataaaat 410


>gnl|LJGI|DC596318 
          Length = 477

 Score = 83.8 bits (42), Expect = 4e-16
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                       
Query: 87  tgctagagcatcaaacttggaattgcgacccttatgggactctggcataaataagcgaat 146
           ||||||| |||| | ||| ||| |||| ||||||||||||||||| |||||| |  ||||
Sbjct: 380 tgctagaacatctagcttcgaaatgcggcccttatgggactctggtataaatcatagaat 439

                                 
Query: 147 ttcaaagcacccattgaacttg 168
           ||||||||||||||||||||||
Sbjct: 440 ttcaaagcacccattgaacttg 461


>gnl|LJGI|TC70355 weakly similar to UniRef100_A7PQ15 Cluster: Chromosome chr18
           scaffold_24, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr18 scaffold_24, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (17%)
          Length = 1004

 Score = 50.1 bits (25), Expect = 6e-06
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 1   atggcatattcttccggagcttctcaaat 29
           ||||||| |||||||||||||||||||||
Sbjct: 99  atggcatcttcttccggagcttctcaaat 127