Miyakogusa Predicted Gene

Lj0g3v0341629.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0341629.1 tr|B8HPL6|B8HPL6_CYAP4 Abortive infection protein
(Precursor) OS=Cyanothece sp. (strain PCC 7425 /
A,53.49,3e-19,Abi,CAAX amino terminal protease; YHET-RELATED,NULL;
ABHYDROLASE DOMAIN-CONTAINING PROTEIN,NULL,CUFF.23403.1
         (288 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP080555 similar to UniRef100_A7QNG0 Cluster: Chromosom...   220   4e-57
gnl|LJGI|TC77321 similar to UniRef100_A7QNG0 Cluster: Chromosome...    72   2e-12

>gnl|LJGI|BP080555 similar to UniRef100_A7QNG0 Cluster: Chromosome chr2 scaffold_132,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_132, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (10%)
          Length = 384

 Score =  220 bits (111), Expect = 4e-57
 Identities = 111/111 (100%)
 Strand = Plus / Minus

                                                                       
Query: 178 tttcttggaatggtgatgggtatcatatttacgcggtcaaggaatttattaccatcaatg 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tttcttggaatggtgatgggtatcatatttacgcggtcaaggaatttattaccatcaatg 325

                                                              
Query: 238 ctattgcatagcctttggaatgcctttgtcttcttagatttgatgaaatag 288
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctattgcatagcctttggaatgcctttgtcttcttagatttgatgaaatag 274


>gnl|LJGI|TC77321 similar to UniRef100_A7QNG0 Cluster: Chromosome chr2 scaffold_132,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_132, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (50%)
          Length = 579

 Score = 71.9 bits (36), Expect = 2e-12
 Identities = 126/156 (80%)
 Strand = Plus / Plus

                                                                       
Query: 43  tgggaggagatagttttccgtggttttctactcccatccctttccaaatacatgcctgtg 102
           ||||||||||| || ||||||||||| || ||||||||  |  | |  ||||||||||| 
Sbjct: 284 tgggaggagattgtgttccgtggtttccttctcccatctttaactaggtacatgcctgta 343

                                                                       
Query: 103 tggtgtgcaatactggtaagttcaattgcctttgcgcttgcacattttaatattcaaagg 162
           ||| |||||||| | || || ||| | || |||||  | ||||||||||||||||| |||
Sbjct: 344 tggagtgcaatattagttagctcagtagcttttgccttggcacattttaatattcagagg 403

                                               
Query: 163 atgctgccacttatatttcttggaatggtgatgggt 198
           ||| | || |||||||||||||| || || ||||||
Sbjct: 404 atgatacctcttatatttcttggcattgtaatgggt 439