Miyakogusa Predicted Gene
- Lj0g3v0332199.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0332199.1 Non Chatacterized Hit- tr|A3BBU9|A3BBU9_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,44.33,4e-17,FAMILY NOT NAMED,NULL;
Homeobox,Homeodomain,CUFF.22642.1
(792 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58704 weakly similar to UniRef100_A7P748 Cluster: Chr... 1522 0.0
gnl|LJGI|TC63680 weakly similar to UniRef100_A7P748 Cluster: Chr... 373 e-102
gnl|LJGI|AV774440 weakly similar to UniRef100_Q0DC47 Cluster: Os... 168 3e-41
gnl|LJGI|TC66099 UniRef100_Q2VF20 Cluster: Myogenic factor MyoD;... 139 3e-32
gnl|LJGI|DC597159 similar to UniRef100_A8NYX1 Cluster: Predicted... 80 2e-14
>gnl|LJGI|TC58704 weakly similar to UniRef100_A7P748 Cluster: Chromosome chr9
scaffold_7, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr9 scaffold_7, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (54%)
Length = 1096
Score = 1522 bits (768), Expect = 0.0
Identities = 786/792 (99%)
Strand = Plus / Plus
Query: 1 atggttgaactgagcttaatcgattctccatttccgaagctctctactgaccagatgctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 atggttgaactgagcttaatcgattctccatttccgaagctctctactgaccagatgctg 203
Query: 61 gaattggagagaatctacaatgacatgggagaaaatgcatttgatcagaatctctgccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattggagagaatctacaatgacatgggagaaaatgcatttgatcagaatctctgccag 263
Query: 121 gagattgctgcaactttgagtgctgctaatacatccatatcatgggaacaggtgcagcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gagattgctgcaactttgagtgctgctaatacatccatatcatgggaacaggtgcagcag 323
Query: 181 tggttccaaaataagcttcacgagtcacaggatcgagctgcttcactgaatcaacttgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tggttccaaaataagcttcacgagtcacaggatcgagctgcttcactgaatcaacttgtt 383
Query: 241 gatatttcagatacacccagtttaagaagctctacagttctacaaggtaatcgaggtgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gatatttcagatacacccagtttaagaagctctacagttctacaaggtaatcgaggtgca 443
Query: 301 gttgtttcagacttggcatttgaagcaagatctacgaaagacttagcatggcatgatgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gttgtttcagacttggcatttgaagcaagatctacgaaagacttagcatggcatgatgtt 503
Query: 361 tcaatgcttcttaactacagagttctgagcactggcgaacttgaagctcgtgtacgatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tcaatgcttcttaactacagagttctgagcactggcgaacttgaagctcgtgtacgatat 563
Query: 421 gctggatttggcaagggggaggatgagtgggtgaatgtgaaatacggggtgcgagataga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gctggatttggcaagggggaggatgagtgggtgaatgtgaaatacggggtgcgagataga 623
Query: 481 tctatcccattggaacctgcagagtgccacaagggcaaggaaggagatcttgtactatgt 540
|||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 624 tctatcccattggaaccttcagagtgccacaaggtgaaggatggagatcttgtactatgt 683
Query: 541 ttcccggaaagggatgattatgccctctactgtgatgctcgtgtattaagcatccagagg 600
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ttcctggaaagggatgattatgccctctactgtgatgctcgtgtattaagcatccagagg 743
Query: 601 aagcaacacgatgagacagattgcaagtgcatctacactgttcgatttctccatgacaac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 aagcaacacgatgagacagattgcaagtgcatctacactgttcgatttctccatgacaac 803
Query: 661 tctgaggaagcaattcattgggagagggtatgctataggcctacacaagaggaatctgtt 720
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tctgaggaagcaattcattggaagagggtatgctataggcctacacaagaggaatctgtt 863
Query: 721 gtctaccataactcaccagaacctacaatagaacccagcatgagtgccatagagaacttg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 gtctaccataactcaccagaacctacaatagaacccagcatgagtgccatagagaacttg 923
Query: 781 tggggatgaaag 792
||||||||||||
Sbjct: 924 tggggatgaaag 935
>gnl|LJGI|TC63680 weakly similar to UniRef100_A7P748 Cluster: Chromosome chr9
scaffold_7, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr9 scaffold_7, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (30%)
Length = 962
Score = 373 bits (188), Expect = e-102
Identities = 377/440 (85%)
Strand = Plus / Plus
Query: 318 atttgaagcaagatctacgaaagacttagcatggcatgatgtttcaatgcttcttaacta 377
||||||||||| ||||| ||||||||||||||||||||||||| || | ||||||
Sbjct: 287 atttgaagcaaaatctaagaaagacttagcatggcatgatgttggaacgtgggttaactt 346
Query: 378 cagagttctgagcactggcgaacttgaagctcgtgtacgatatgctggatttggcaaggg 437
|| | | | | ||| |||||||||||| || ||||||||||||||||| || |||||
Sbjct: 347 caaatattcggggactcgcgaacttgaagttcttgtacgatatgctggatatgacaaggt 406
Query: 438 ggaggatgagtgggtgaatgtgaaatacggggtgcgagatagatctatcccattggaacc 497
||| || |||||||||||||||||| ||| | ||||||| ||||||||||||||||||||
Sbjct: 407 ggatgaagagtgggtgaatgtgaaaaacgagatgcgagagagatctatcccattggaacc 466
Query: 498 tgcagagtgccacaagggcaaggaaggagatcttgtactatgtttcccggaaagggatga 557
| || |||| ||||||| ||||| |||||||||| | ||||||| | |||||||||| |
Sbjct: 467 ttcacagtgtcacaaggtgaaggatggagatcttgcagtatgtttacaggaaagggatca 526
Query: 558 ttatgccctctactgtgatgctcgtgtattaagcatccagaggaagcaacacgatgagac 617
|||||| ||||||| ||||||||||||| | || || || |||| |||||| |||| |||
Sbjct: 527 ttatgcactctactttgatgctcgtgtagtgagaattcaaaggaggcaacatgatgcgac 586
Query: 618 agattgcaagtgcatctacactgttcgatttctccatgacaactctgaggaagcaattca 677
|||||||||||| |||| ||||||| ||||||||||||||||||||||||||| |||| |
Sbjct: 587 agattgcaagtgtatcttcactgttagatttctccatgacaactctgaggaagaaattga 646
Query: 678 ttgggagagggtatgctataggcctacacaagaggaatctgttgtctaccataactcacc 737
|||| ||| ||||| ||||||||||||||||||||||||||||||| |||||||| | ||
Sbjct: 647 ttggaagaaggtatactataggcctacacaagaggaatctgttgtcgaccataacacccc 706
Query: 738 agaacctacaatagaaccca 757
||||||||| | ||||||||
Sbjct: 707 agaacctaccaaagaaccca 726
Score = 69.9 bits (35), Expect = 2e-11
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 697 aggcctacacaagaggaatctgttgtctaccataactcaccagaacctacaatagaaccc 756
||||||| ||||||||||||||||| || ||||| ||| ||||||||||| | ||| |||
Sbjct: 729 aggcctaaacaagaggaatctgttggctgccatagctccccagaacctaccaaagagccc 788
Query: 757 agcatgagtgccatagagaactt 779
||| | |||| ||| ||||||||
Sbjct: 789 agcctaagtgacattgagaactt 811
>gnl|LJGI|AV774440 weakly similar to UniRef100_Q0DC47 Cluster: Os06g0485100 protein;
n=1; Oryza sativa Japonica Group|Rep: Os06g0485100
protein - Oryza sativa subsp. japonica (Rice), partial
(21%)
Length = 561
Score = 168 bits (85), Expect = 3e-41
Identities = 130/145 (89%)
Strand = Plus / Minus
Query: 523 ggagatcttgtactatgtttcccggaaagggatgattatgccctctactgtgatgctcgt 582
|||||||||||||||||||||| | | |||| ||||||||||||||| | ||||||||||
Sbjct: 558 ggagatcttgtactatgtttcctgaataggggtgattatgccctctattttgatgctcgt 499
Query: 583 gtattaagcatccagaggaagcaacacgatgagacagattgcaagtgcatctacactgtt 642
||| |||| ||||| |||| || ||||||| |||||||||||||||||||| |||||||
Sbjct: 498 gtagtaagaatccataggaggctacacgatccgacagattgcaagtgcatcttcactgtt 439
Query: 643 cgatttctccatgacaactctgagg 667
||||||||||||||| |||||||||
Sbjct: 438 cgatttctccatgaccactctgagg 414
Score = 54.0 bits (27), Expect = 1e-06
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 665 aggaagcaattcattgggagagggtatgctataggcctacaca 707
|||||| |||||||||| || |||||| |||||||||||||||
Sbjct: 312 aggaagaaattcattggaagggggtatactataggcctacaca 270
>gnl|LJGI|TC66099 UniRef100_Q2VF20 Cluster: Myogenic factor MyoD; n=1; Paralichthys
olivaceus|Rep: Myogenic factor MyoD - Paralichthys
olivaceus (Japanese flounder), partial (5%)
Length = 736
Score = 139 bits (70), Expect = 3e-32
Identities = 180/216 (83%), Gaps = 3/216 (1%)
Strand = Plus / Plus
Query: 13 agcttaatcgattctccatttccgaagctctctactgaccagatgctggaattggagaga 72
||||||| ||| |||||||| |||||||| |||||| ||| | | ||||||||||| |
Sbjct: 277 agcttaacagatcctccatttttgaagctctttactgatcagctacgggaattggagaaa 336
Query: 73 atctacaatgacatgggagaaaatgcatttgatcagaatctctgccaggagattgctgca 132
| ||||| |||||||||||||| ||||||||||||||| |||||| |||||||||
Sbjct: 337 tgttgtaatgaaatgggagaaaatgcccttgatcagaatctctaccaggaaattgctgca 396
Query: 133 actttgagtgctgctaataca---tccatatcatgggaacaggtgcagcagtggttccaa 189
| ||| ||||||| |||| | |||| |||||||||||||| ||||||||||||||||
Sbjct: 397 aattttagtgctgggaataaaacttccaaatcatgggaacaggagcagcagtggttccaa 456
Query: 190 aataagcttcacgagtcacaggatcgagctgcttca 225
||||||||| | |||||| |||||| || |||||||
Sbjct: 457 aataagcttaaagagtcagaggatcaagttgcttca 492
>gnl|LJGI|DC597159 similar to UniRef100_A8NYX1 Cluster: Predicted protein; n=1;
Coprinopsis cinerea okayama7#130|Rep: Predicted protein
- Coprinopsis cinerea okayama7#130, partial (6%)
Length = 581
Score = 79.8 bits (40), Expect = 2e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 154 tccatatcatgggaacaggtgcagcagtggttccaaaataagcttcacgagtcacaggat 213
|||||||||| |||||||||||| || |||||||||||||||||| ||| ||||||||||
Sbjct: 441 tccatatcataggaacaggtgcaacactggttccaaaataagcttaacgggtcacaggat 500