Miyakogusa Predicted Gene

Lj0g3v0317589.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0317589.1 CUFF.21482.1
         (480 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77869 similar to UniRef100_A7P4I3 Cluster: Chromosome...    76   2e-13
gnl|LJGI|DC593634 weakly similar to UniRef100_A8EH71 Cluster: Ch...    52   3e-06
gnl|LJGI|TC70698 weakly similar to UniRef100_Q29AF0 Cluster: GA1...    52   3e-06

>gnl|LJGI|TC77869 similar to UniRef100_A7P4I3 Cluster: Chromosome chr4 scaffold_6,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr4 scaffold_6, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (40%)
          Length = 1269

 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 59/66 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgggtctacatataatttcagtcaacctccctcctctggttataaccatccaggactgg 60
            ||||||| ||||| |||| ||||||||| || |||||||||||||||||||||||||  |
Sbjct: 1167 atgggtccacatacaattacagtcaaccaccttcctctggttataaccatccaggacaag 1226

                  
Query: 61   gttatg 66
            ||||||
Sbjct: 1227 gttatg 1232


>gnl|LJGI|DC593634 weakly similar to UniRef100_A8EH71 Cluster: Chloride transporter,
           chloride channel (ClC) family; n=1; Burkholderia
           pseudomallei 406e|Rep: Chloride transporter, chloride
           channel (ClC) family - Burkholderia pseudomallei 406e,
           partial (4%)
          Length = 471

 Score = 52.0 bits (26), Expect = 3e-06
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                     
Query: 389 ttcttatggtgctgtttatactcacaaaccttcttatgctagtgttgttgctaatgga 446
           |||||||||||||| |||| |||| | |||| |||||||||||| || | ||||||||
Sbjct: 352 ttcttatggtgctggttatgctcagacacctgcttatgctagtgatggtactaatgga 295


>gnl|LJGI|TC70698 weakly similar to UniRef100_Q29AF0 Cluster: GA14643-PA; n=1;
           Drosophila pseudoobscura|Rep: GA14643-PA - Drosophila
           pseudoobscura (Fruit fly), partial (5%)
          Length = 695

 Score = 52.0 bits (26), Expect = 3e-06
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                     
Query: 389 ttcttatggtgctgtttatactcacaaaccttcttatgctagtgttgttgctaatgga 446
           |||||||||||||| |||| |||| | |||| |||||||||||| || | ||||||||
Sbjct: 344 ttcttatggtgctggttatgctcagacacctgcttatgctagtgatggtactaatgga 401