Miyakogusa Predicted Gene

Lj0g3v0317559.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0317559.2 Non Chatacterized Hit- tr|I1PJV6|I1PJV6_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,40.1,4e-19,SAGA-Tad1,Transcriptional coactivator SAGA-type
complex, Ada1/Tada1; SUBFAMILY NOT NAMED,NULL; FAMIL,CUFF.21554.2
         (610 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75597 similar to UniRef100_A7P4Y0 Cluster: Chromosome...   333   8e-91
gnl|LJGI|FS351673 similar to UniRef100_A7P4Y0 Cluster: Chromosom...   196   1e-49

>gnl|LJGI|TC75597 similar to UniRef100_A7P4Y0 Cluster: Chromosome chr4 scaffold_6,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr4 scaffold_6, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (79%)
          Length = 1697

 Score =  333 bits (168), Expect = 8e-91
 Identities = 490/597 (82%), Gaps = 9/597 (1%)
 Strand = Plus / Plus

                                                                        
Query: 14   caattgttgaagatggggaggaggtggagcagttgaaccgcctcagttttgccagaagtc 73
            ||||||||||||||||||| || ||||| ||||| |||||||| | |||  | |||||||
Sbjct: 669  caattgttgaagatggggaagaagtggatcagtttaaccgcctgaatttctctagaagtc 728

                                                                        
Query: 74   ccctgatagcaccacttgggattcctcactgctctgcaagtgtgggtggggcccgcaaat 133
            || ||||||||||||||||||||||| | || || |||||||| |||||||| |||||| 
Sbjct: 729  ccttgatagcaccacttgggattccttattgttcagcaagtgtaggtggggctcgcaaag 788

                                                                        
Query: 134  cattgccagtgaatagcgctagtgattttgttagtttttgtgacagtggtagtttacctg 193
            |||||||||||  ||||  | ||||||||| |||||  |||||||||||| | ||  |||
Sbjct: 789  cattgccagtgtctagcattggtgattttgatagttgctgtgacagtggttggttgtctg 848

                                                                        
Query: 194  atacagatacactgagaaggcgcatggagcagattgctactgtacagggtcttggaggtg 253
            |||||||||| ||| ||||||| |||||||||||| || | |||||||||||||||||||
Sbjct: 849  atacagatacgctgcgaaggcgaatggagcagattactgcagtacagggtcttggaggtg 908

                                                                        
Query: 254  tttctatggaatgtgcaaatatgttgaataatgtgttggattcgtacctgaaaaggttga 313
            |||| ||||||||||| ||| ||||||||||  ||||||||   ||| ||||| ||||||
Sbjct: 909  tttccatggaatgtgccaatgtgttgaataacatgttggatgtatacttgaaacggttga 968

                                                                        
Query: 314  tcaggtcttgtgtcgatttagtgagcgctaggtctgcgaatgagaatgagccgaccaagc 373
            ||||||||||||| || |||||| | ||||||||  |      |||||| | ||  ||||
Sbjct: 969  tcaggtcttgtgttgaattagtgggagctaggtccac------gaatgatctgaggaagc 1022

                                                                        
Query: 374  tccctgtctcaaaaccgcagattcaggggaagatcatgaatggcatgtggccaaacaatc 433
             ||||| | | |||| ||||||||| || ||| |||| |||||  || ||||||  ||||
Sbjct: 1023 cccctgcccccaaacagcagattcatggtaaggtcataaatggtgtgaggccaagtaatc 1082

                                                                        
Query: 434  agtcacatgtgcagcagagtcctggtgggccggcagagcctgaacttgaacacagacccc 493
            |   |||  |   ||||| | ||||||||| |||||||||||  | |||||| ||||| |
Sbjct: 1083 atctacacat---gcagaatactggtgggctggcagagcctgtgcctgaacatagaccac 1139

                                                                        
Query: 494  agatctccatatctttgcatgattttaaagttgccatggaactaaatccacagcaactcg 553
                ||| || ||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 1140 catgctcaatttctttgcatgattttaaagttgccatggagctaaatccacagcaacttg 1199

                                                                     
Query: 554  gagaagattggccactacagttggagaaactttctatgcaatccttagagaaataac 610
            ||||||||||||||||   |||||||||| | || |||||||| || ||||||||||
Sbjct: 1200 gagaagattggccactgatgttggagaaaatatccatgcaatcgtttgagaaataac 1256


>gnl|LJGI|FS351673 similar to UniRef100_A7P4Y0 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (8%)
          Length = 464

 Score =  196 bits (99), Expect = 1e-49
 Identities = 102/103 (99%)
 Strand = Plus / Minus

                                                                       
Query: 508 ttgcatgattttaaagttgccatggaactaaatccacagcaactcggagaagattggcca 567
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ttgcatgattttaaagttgccatggaactaaatccacagcaactcggagaagattggcca 405

                                                      
Query: 568 ctacagttggagaaactttctatgcaatccttagagaaataac 610
           ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 404 ctacagttggagaaactttttatgcaatccttagagaaataac 362