Miyakogusa Predicted Gene

Lj0g3v0288819.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0288819.1 gene.g22478.t1.1
         (1845 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81302 similar to UniRef100_A7PI35 Cluster: Chromosome...  1072   0.0  

>gnl|LJGI|TC81302 similar to UniRef100_A7PI35 Cluster: Chromosome chr13 scaffold_17,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr13 scaffold_17, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (18%)
          Length = 733

 Score = 1072 bits (541), Expect = 0.0
 Identities = 555/557 (99%), Gaps = 2/557 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1290 ggatgatggtatataccgtg-caattgatatatatctcaagactcatccctggatgacag 1348
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 9    ggatgatggtatataccgtgncaattgatatatatctcaagactcatccctggatgacag 68

                                                                        
Query: 1349 actcagagaaggaacaaatctgcaggctcatgaattgccagaagctgtctttggaagcca 1408
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69   actcagagaaggaacaaatctgcaggctcatgaattgccagaagctgtctttggaagcca 128

                                                                        
Query: 1409 gcacccatgcagcccaaaatgagaggctcccacttagagttgttgtccaagtcctgttct 1468
            || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129  gc-cccatgcagcccaaaatgagaggctcccacttagagttgttgtccaagtcctgttct 187

                                                                        
Query: 1469 ttgaacagctgaagctcagaacctctgtagctggttggttttttacttctgaaaaccttg 1528
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188  ttgaacagctgaagctcagaacctctgtagctggttggttttttacttctgaaaaccttg 247

                                                                        
Query: 1529 aaaacacacagaacctgagtggaaaccttgctctgctgaggaatattgatgggaacacac 1588
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248  aaaacacacagaacctgagtggaaaccttgctctgctgaggaatattgatgggaacacac 307

                                                                        
Query: 1589 caccaaaccctgtcttggcatttgacaacatgaaagatagagtttctgagcttgagaagg 1648
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308  caccaaaccctgtcttggcatttgacaacatgaaagatagagtttctgagcttgagaagg 367

                                                                        
Query: 1649 agtgcttgaccatgaagcatgaattggagaaaatgatgaagtctaataagggaagttgga 1708
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368  agtgcttgaccatgaagcatgaattggagaaaatgatgaagtctaataagggaagttgga 427

                                                                        
Query: 1709 acatgattctcaggaaattgagttgcaggttgattcctaagccctctaatgggaaagtct 1768
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428  acatgattctcaggaaattgagttgcaggttgattcctaagccctctaatgggaaagtct 487

                                                                        
Query: 1769 ccaagccttgcaggaagtccaagatttcaccagcacaggtagaagaaaatgctttggcag 1828
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488  ccaagccttgcaggaagtccaagatttcaccagcacaggtagaagaaaatgctttggcag 547

                             
Query: 1829 acttggcagtgaagtga 1845
            |||||||||||||||||
Sbjct: 548  acttggcagtgaagtga 564