Miyakogusa Predicted Gene
- Lj0g3v0284669.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0284669.1 Non Chatacterized Hit- tr|I3S180|I3S180_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.47,0,coiled-coil,NULL; PNAS-RELATED,Uncharacterised conserved
protein UCP023322, transmembrane eukaryotic,CUFF.19151.1
(572 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61004 similar to UniRef100_Q4TZT9 Cluster: Fb27; n=1;... 1092 0.0
gnl|LJGI|TC59584 similar to UniRef100_Q4TZT9 Cluster: Fb27; n=1;... 1092 0.0
>gnl|LJGI|TC61004 similar to UniRef100_Q4TZT9 Cluster: Fb27; n=1; Gossypium
hirsutum|Rep: Fb27 - Gossypium hirsutum (Upland cotton)
(Gossypium mexicanum), partial (91%)
Length = 1094
Score = 1092 bits (551), Expect = 0.0
Identities = 565/572 (98%)
Strand = Plus / Plus
Query: 1 atggcatatcccttctcagatttcaagtactcagatggcctcactgtggtgggtatatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 atggcatatcccttctcagatttcaagtactcagatggcctcactgtggtgggtatatcc 294
Query: 61 ttttgcacagctattgtttgtgaggccatctcatgggttcttatctaccgtaccaattcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ttttgcacagctattgtttgtgaggccatctcatgggttcttatctaccgtaccaattcg 354
Query: 121 tacaagaaccttcggtcctccatagacaaagcctctaagaaacttgagacaatgaagaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tacaagaaccttcggtcctccatagacaaagcctctaagaaacttgagacaatgaagaca 414
Query: 181 gacagccagaaaattaacattaagaagtcgaagaccnnnnnnnttgaccgtgttgagaca 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 415 gacagccagaaaattaacattaagaagtcgaagaccaaaaaaattgaccgtgttgagaca 474
Query: 241 agcctcaaagaatcaagtcgtgacttgtctctcttcaagttcaagtctgggggtgtggta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 agcctcaaagaatcaagtcgtgacttgtctctcttcaagttcaagtctgggggtgtggta 534
Query: 301 gctctggttctctttgtggtttttgggctgctgaattcactctttgaaggaaaggtagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 gctctggttctctttgtggtttttgggctgctgaattcactctttgaaggaaaggtagtt 594
Query: 361 gctaaattgcccttcaagccttttggtcttgttatgaagatgagtcatcgagggttgcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 gctaaattgcccttcaagccttttggtcttgttatgaagatgagtcatcgagggttgcaa 654
Query: 421 ggtactgatcccactgattgttccatggcatttctatacttcttgtgttccattagtatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ggtactgatcccactgattgttccatggcatttctatacttcttgtgttccattagtatc 714
Query: 481 agaacaaatttgcagaagttcttaggttttgcaccgccaaggggtgcaagtgctggcctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 agaacaaatttgcagaagttcttaggttttgcaccgccaaggggtgcaagtgctggcctc 774
Query: 541 ttccccatgccagacccgaagaccagttgatt 572
||||||||||||||||||||||||||||||||
Sbjct: 775 ttccccatgccagacccgaagaccagttgatt 806
>gnl|LJGI|TC59584 similar to UniRef100_Q4TZT9 Cluster: Fb27; n=1; Gossypium
hirsutum|Rep: Fb27 - Gossypium hirsutum (Upland cotton)
(Gossypium mexicanum), partial (91%)
Length = 1201
Score = 1092 bits (551), Expect = 0.0
Identities = 565/572 (98%)
Strand = Plus / Plus
Query: 1 atggcatatcccttctcagatttcaagtactcagatggcctcactgtggtgggtatatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 atggcatatcccttctcagatttcaagtactcagatggcctcactgtggtgggtatatcc 351
Query: 61 ttttgcacagctattgtttgtgaggccatctcatgggttcttatctaccgtaccaattcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ttttgcacagctattgtttgtgaggccatctcatgggttcttatctaccgtaccaattcg 411
Query: 121 tacaagaaccttcggtcctccatagacaaagcctctaagaaacttgagacaatgaagaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tacaagaaccttcggtcctccatagacaaagcctctaagaaacttgagacaatgaagaca 471
Query: 181 gacagccagaaaattaacattaagaagtcgaagaccnnnnnnnttgaccgtgttgagaca 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 472 gacagccagaaaattaacattaagaagtcgaagaccaaaaaaattgaccgtgttgagaca 531
Query: 241 agcctcaaagaatcaagtcgtgacttgtctctcttcaagttcaagtctgggggtgtggta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 agcctcaaagaatcaagtcgtgacttgtctctcttcaagttcaagtctgggggtgtggta 591
Query: 301 gctctggttctctttgtggtttttgggctgctgaattcactctttgaaggaaaggtagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gctctggttctctttgtggtttttgggctgctgaattcactctttgaaggaaaggtagtt 651
Query: 361 gctaaattgcccttcaagccttttggtcttgttatgaagatgagtcatcgagggttgcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 gctaaattgcccttcaagccttttggtcttgttatgaagatgagtcatcgagggttgcaa 711
Query: 421 ggtactgatcccactgattgttccatggcatttctatacttcttgtgttccattagtatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 ggtactgatcccactgattgttccatggcatttctatacttcttgtgttccattagtatc 771
Query: 481 agaacaaatttgcagaagttcttaggttttgcaccgccaaggggtgcaagtgctggcctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 agaacaaatttgcagaagttcttaggttttgcaccgccaaggggtgcaagtgctggcctc 831
Query: 541 ttccccatgccagacccgaagaccagttgatt 572
||||||||||||||||||||||||||||||||
Sbjct: 832 ttccccatgccagacccgaagaccagttgatt 863