Miyakogusa Predicted Gene
- Lj0g3v0282449.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0282449.1 Non Chatacterized Hit- tr|I3T570|I3T570_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.54,0,coiled-coil,NULL; helix loop helix
domain,Helix-loop-helix domain; HLH, helix-loop-helix
DNA-binding,CUFF.18790.1
(825 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71872 similar to UniRef100_Q8GWK7 Cluster: Protein BE... 1628 0.0
gnl|LJGI|TC66245 similar to UniRef100_Q8GZ13 Cluster: Protein BE... 351 4e-96
gnl|LJGI|TC79152 similar to UniRef100_A7P2H7 Cluster: Chromosome... 113 2e-24
gnl|LJGI|DC594807 similar to UniRef100_Q8GWK7 Cluster: Protein B... 96 4e-19
gnl|LJGI|AV772495 homologue to UniRef100_A2Q3E9 Cluster: Helix-l... 62 6e-09
gnl|LJGI|TC78089 similar to UniRef100_A7Q723 Cluster: Chromosome... 62 6e-09
gnl|LJGI|TC62805 similar to UniRef100_A2Q3E9 Cluster: Helix-loop... 54 1e-06
gnl|LJGI|AV424133 similar to UniRef100_A8TLW5 Cluster: BHLH tran... 52 6e-06
>gnl|LJGI|TC71872 similar to UniRef100_Q8GWK7 Cluster: Protein BEE 3; n=1;
Arabidopsis thaliana|Rep: Protein BEE 3 - Arabidopsis
thaliana (Mouse-ear cress), partial (41%)
Length = 1161
Score = 1628 bits (821), Expect = 0.0
Identities = 824/825 (99%)
Strand = Plus / Plus
Query: 1 atggctgaaatcactgagaatttgcagagcatcagaccctcttttcctttcttagacatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 atggctgaaatcactgagaatttgcagagcatcagaccctcttttcctttcttagacatt 100
Query: 61 gatccaagcatggaactcctaagccaattcatggggatgaatccacaacatgtcatggac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 gatccaagcatggaactcctaagccaattcatggggatgaatccacaacatgtcatggac 160
Query: 121 aactcaaacatgaacatgaacatgcagaacttgatgcctttctcctgtgacagcattttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 aactcaaacatgaacatgaacatgcagaacttgatgcctttctcctgtgacagcattttg 220
Query: 181 ggccctgaagagccagagtttcctgaaaacttagaaggaaccttccctggtcttgttcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 ggccctgaagagccagagtttcctgaaaacttagaaggaaccttccctggtcttgttcat 280
Query: 241 catgtaagtcacaatgcatttccagtttcacttcccatttttccagcagaagatgaaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 catgtaagtcacaatgcatttccagtttcacttcccatttttccagcagaagatgaaatc 340
Query: 301 attgaaggtaaaaagaggaagatgataatggatattcaggagaccagttcagcaaactct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 attgaaggtaaaaagaggaagatgataatggatattcaggagaccagttcagcaaactct 400
Query: 361 actcctgcagtttctgagagtggaagcaggataaaaaataattctggaagaggaaagagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 actcctgcagtttctgagagtggaagcaggataaaaaataattctggaagaggaaagagg 460
Query: 421 gccaaaagcaatgtaacagaagaggagaaagaaaaggaagtggttcatgtcagagccaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gccaaaagcaatgtaacagaagaggagaaagaaaaggaagtggttcatgtcagagccaga 520
Query: 481 agaggtcaagctactgatagtcacagtttagcagaaagggtcagaagagggaaaatcaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 agaggtcaagctactgatagtcacagtttagcagaaagggtcagaagagggaaaatcaat 580
Query: 541 gagaaactaaggtgcttacagaacattgttcctggatgttacaagaccatgggcatggca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 gagaaactaaggtgcttacagaacattgttcctggatgttacaagaccatgggcatggca 640
Query: 601 gtaatgttggatgaaatcataaactatgtgcagtctttgcagcatcaagtggagttcctt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 gtaatgttggatgaaatcataaactatgtgcagtctttgcagcatcaagtggagttcctt 700
Query: 661 tctttgaagcttacagctgcaagtacctattatgacttcaattctgagacagatgctatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 tctttgaagcttacagctgcaagtacctattatgacttcaattctgagacagatgctatt 760
Query: 721 gaaacaatgcagagagcaagggcatcagaggcaaaagagttagccaggtataagagagaa 780
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 761 gaaacaatgcagagagcaagggcatcagaggcgaaagagttagccaggtataagagagaa 820
Query: 781 gaatatgggggaatttcttgctttcaaccaacttggcccctttga 825
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 gaatatgggggaatttcttgctttcaaccaacttggcccctttga 865
>gnl|LJGI|TC66245 similar to UniRef100_Q8GZ13 Cluster: Protein BEE 1; n=1;
Arabidopsis thaliana|Rep: Protein BEE 1 - Arabidopsis
thaliana (Mouse-ear cress), partial (39%)
Length = 998
Score = 351 bits (177), Expect = 4e-96
Identities = 315/361 (87%)
Strand = Plus / Plus
Query: 458 aagtggttcatgtcagagccagaagaggtcaagctactgatagtcacagtttagcagaaa 517
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 aagtagttcatgttagagccagaagaggtcaagctactgatagtcacagtttagcagaaa 552
Query: 518 gggtcagaagagggaaaatcaatgagaaactaaggtgcttacagaacattgttcctggat 577
|||| |||||||| ||||||||||| ||||| | |||||| || |||||||| || ||||
Sbjct: 553 gggttagaagaggtaaaatcaatgaaaaacttaagtgcttgcaaaacattgtcccaggat 612
Query: 578 gttacaagaccatgggcatggcagtaatgttggatgaaatcataaactatgtgcagtctt 637
|||||||||| ||||| |||||| ||||||||||||| |||||||||||||| ||||| |
Sbjct: 613 gttacaagactatgggtatggcaataatgttggatgagatcataaactatgtccagtcct 672
Query: 638 tgcagcatcaagtggagttcctttctttgaagcttacagctgcaagtacctattatgact 697
|||| ||||||||||||||||| ||| ||||||| || || ||||| |||| ||||||||
Sbjct: 673 tgcaacatcaagtggagttcctctctatgaagctcactgcagcaagcaccttttatgact 732
Query: 698 tcaattctgagacagatgctattgaaacaatgcagagagcaagggcatcagaggcaaaag 757
||||||| |||| | || || | || |||||||||||||||||| ||| ||||||||||
Sbjct: 733 tcaattcagagataaattctttagaggcaatgcagagagcaagggtatccgaggcaaaag 792
Query: 758 agttagccaggtataagagagaagaatatgggggaatttcttgctttcaaccaacttggc 817
|||| || | ||| || ||||| ||||| ||| ||||||||||||||||||||||||
Sbjct: 793 agttggcaaagtacgtgacagaaggatatgaaggagtttcttgctttcaaccaacttggc 852
Query: 818 c 818
|
Sbjct: 853 c 853
>gnl|LJGI|TC79152 similar to UniRef100_A7P2H7 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 1127
Score = 113 bits (57), Expect = 2e-24
Identities = 75/81 (92%)
Strand = Plus / Plus
Query: 653 agttcctttctttgaagcttacagctgcaagtacctattatgacttcaattctgagacag 712
||||||||||||||||||||||| ||||||||| |||||||||||| ||||| |||||||
Sbjct: 227 agttcctttctttgaagcttacaactgcaagtatctattatgactttaattcagagacag 286
Query: 713 atgctattgaaacaatgcaga 733
||||| | |||||||||||||
Sbjct: 287 atgctttagaaacaatgcaga 307
>gnl|LJGI|DC594807 similar to UniRef100_Q8GWK7 Cluster: Protein BEE 3; n=1;
Arabidopsis thaliana|Rep: Protein BEE 3 - Arabidopsis
thaliana (Mouse-ear cress), partial (8%)
Length = 413
Score = 95.6 bits (48), Expect = 4e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 653 agttcctttctttgaagcttacagctgcaagtacctattatgacttcaattctgagacag 712
||||||||||||||||||||||| ||||||||| |||||||||||| ||||| |||||||
Sbjct: 72 agttcctttctttgaagcttacaactgcaagtatctattatgactttaattcagagacag 131
Query: 713 atgc 716
||||
Sbjct: 132 atgc 135
>gnl|LJGI|AV772495 homologue to UniRef100_A2Q3E9 Cluster: Helix-loop-helix
DNA-binding; n=1; Medicago truncatula|Rep:
Helix-loop-helix DNA-binding - Medicago truncatula
(Barrel medic), partial (19%)
Length = 572
Score = 61.9 bits (31), Expect = 6e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 482 gaggtcaagctactgatagtcacagtttagcagaaaggg 520
|||||||||||||||||||||| || |||||||||||||
Sbjct: 443 gaggtcaagctactgatagtcatagcttagcagaaaggg 405
>gnl|LJGI|TC78089 similar to UniRef100_A7Q723 Cluster: Chromosome chr5 scaffold_58,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_58, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 1046
Score = 61.9 bits (31), Expect = 6e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 610 gatgaaatcataaactatgtgcagtctttgcagcatcaagtggagttcctttctttgaa 668
|||||||| ||||||||||| ||||| ||||||| |||||| |||||||| ||| ||||
Sbjct: 207 gatgaaattataaactatgtccagtcattgcagcgtcaagttgagttcctatctatgaa 265
Score = 58.0 bits (29), Expect = 9e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 464 ttcatgtcagagccagaagaggtcaagctactgatag 500
||||||| ||||| |||||||||||||||||||||||
Sbjct: 61 ttcatgtgagagcaagaagaggtcaagctactgatag 97
>gnl|LJGI|TC62805 similar to UniRef100_A2Q3E9 Cluster: Helix-loop-helix DNA-binding;
n=1; Medicago truncatula|Rep: Helix-loop-helix
DNA-binding - Medicago truncatula (Barrel medic),
partial (61%)
Length = 831
Score = 54.0 bits (27), Expect = 1e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 608 tggatgaaatcataaactatgtgcagtctttgcagcatcaagtggag 654
||||||||||||| ||| ||||||| |||||||| | ||||||||||
Sbjct: 774 tggatgaaatcattaaccatgtgcaatctttgcaacgtcaagtggag 820
>gnl|LJGI|AV424133 similar to UniRef100_A8TLW5 Cluster: BHLH transcription factor
Upa20; n=1; Capsicum annuum|Rep: BHLH transcription
factor Upa20 - Capsicum annuum (Bell pepper), partial
(19%)
Length = 307
Score = 52.0 bits (26), Expect = 6e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 604 atgttggatgaaatcataaactatgtgcagtctttgcagcatcaagtggagttc 657
|||||||||||||| || || ||||| ||||| || ||| ||||||||||||||
Sbjct: 66 atgttggatgaaataatcaattatgttcagtcattacagaatcaagtggagttc 119