Miyakogusa Predicted Gene

Lj0g3v0277749.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0277749.1 Non Chatacterized Hit- tr|K4B1G3|K4B1G3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,60.98,5e-19,PECTIN ACETYLESTERASE,NULL;
NOTUM-RELATED,Pectinacetylesterase;
PAE,Pectinacetylesterase,CUFF.18448.1
         (261 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68833 similar to UniRef100_A7PRH0 Cluster: Chromosome...   387   e-107
gnl|LJGI|TC61154 similar to UniRef100_Q2HRU2 Cluster: Pectinacet...    68   3e-11

>gnl|LJGI|TC68833 similar to UniRef100_A7PRH0 Cluster: Chromosome chr14 scaffold_27,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_27, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (86%)
          Length = 1792

 Score =  387 bits (195), Expect = e-107
 Identities = 239/253 (94%), Gaps = 3/253 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaagcagctatggatgtttgtgtttgtgggtttggtgactgtgaaatgggtggaaggg 60
           |||||| |||| |||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 488 atgaagaagctgtggatgtttgtgtttgtgggtttggtgattgggaaatgggtggaaggg 547

                                                                       
Query: 61  tttgagaatgctactttggaag---tgcaatatgtcactggaagaggtttctacagacca 117
           ||||||||||||||||||||||   |||||||||||||||||||||||||||| ||||| 
Sbjct: 548 tttgagaatgctactttggaagaagtgcaatatgtcactggaagaggtttctatagacct 607

                                                                       
Query: 118 ttgatggttggtcttactcttattaatggtgctgctgctaaaggagctgtctgcctggat 177
           ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 608 ttgatggttggacttactcttattaatggtgctgctgctaaaggagctgtatgcctggat 667

                                                                       
Query: 178 gggtctctaccgggttaccacttacaccgtggatatggatcaggatcaaacagttggctc 237
           |||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 668 gggtctttaccgggttaccacttgcaccgtggatatggttcaggatcaaacagttggctc 727

                        
Query: 238 atacaattggagg 250
           |||||||||||||
Sbjct: 728 atacaattggagg 740


>gnl|LJGI|TC61154 similar to UniRef100_Q2HRU2 Cluster: Pectinacetylesterase; n=1;
           Medicago truncatula|Rep: Pectinacetylesterase - Medicago
           truncatula (Barrel medic), partial (50%)
          Length = 950

 Score = 67.9 bits (34), Expect = 3e-11
 Identities = 73/86 (84%)
 Strand = Plus / Plus

                                                                       
Query: 151 gctgctaaaggagctgtctgcctggatgggtctctaccgggttaccacttacaccgtgga 210
           |||||||||||||| |||||| |||||||  |  | || |||||||| || || ||||||
Sbjct: 385 gctgctaaaggagcagtctgcttggatggaacattgcctggttaccatttgcatcgtgga 444

                                     
Query: 211 tatggatcaggatcaaacagttggct 236
           |||||||||||| |||| ||||||||
Sbjct: 445 tatggatcaggagcaaatagttggct 470