Miyakogusa Predicted Gene
- Lj0g3v0271879.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0271879.2 Non Chatacterized Hit- tr|K3Z2A8|K3Z2A8_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si020676,60.26,3e-19,Pcc1,EKC/KEOPS complex, subunit
Pcc1,CUFF.17975.2
(294 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72401 similar to UniRef100_A7QF20 Cluster: Chromosome... 208 1e-53
gnl|LJGI|TC64856 similar to UniRef100_A7QF20 Cluster: Chromosome... 200 3e-51
>gnl|LJGI|TC72401 similar to UniRef100_A7QF20 Cluster: Chromosome chr16 scaffold_86,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_86, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (64%)
Length = 547
Score = 208 bits (105), Expect = 1e-53
Identities = 204/237 (86%)
Strand = Plus / Plus
Query: 58 gaagtggactttggatgtgaagagaatgcctccattgtatatgcagccttagctgttgat 117
|||||||| ||||||| |||||||||||| ||||| | |||||| || ||||||||||||
Sbjct: 197 gaagtggattttggatctgaagagaatgcttccatcgcatatgctgctttagctgttgat 256
Query: 118 aaggagttgcacccggacaaagtgacacaactcatgaaggtatctaatggaaagctttca 177
||||||||||| || || ||||| | || ||| |||| ||| ||| |||||||||| |||
Sbjct: 257 aaggagttgcaacctgataaagtaaaacgactgatgacggtgtctgatggaaagctatca 316
Query: 178 gtgcactttgaggcagtagaagcaagatttcttagagcatctttcagtgcttttctagat 237
|||| |||||||||| |||||| |||||||| | ||||| |||||||||||| |||||
Sbjct: 317 gtgcgctttgaggcaacagaagccagatttctccgggcatcattcagtgcttttgtagat 376
Query: 238 gtcctaacactagctacaaacacaattgaagaatttggtcaaggaatggagttgtga 294
||||| | |||||| || || ||||||||||||||||||| ||||||||||||||||
Sbjct: 377 gtccttatactagccacgaaaacaattgaagaatttggtccaggaatggagttgtga 433
>gnl|LJGI|TC64856 similar to UniRef100_A7QF20 Cluster: Chromosome chr16 scaffold_86,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_86, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (64%)
Length = 668
Score = 200 bits (101), Expect = 3e-51
Identities = 203/237 (85%)
Strand = Plus / Plus
Query: 58 gaagtggactttggatgtgaagagaatgcctccattgtatatgcagccttagctgttgat 117
|||||||| ||||||| |||||||||||| ||||| | |||||| || |||||||||| |
Sbjct: 124 gaagtggattttggatctgaagagaatgcttccatcgcatatgctgctttagctgttggt 183
Query: 118 aaggagttgcacccggacaaagtgacacaactcatgaaggtatctaatggaaagctttca 177
||||||||||| || || ||||| | || ||| |||| ||| ||| |||||||||| |||
Sbjct: 184 aaggagttgcaacctgataaagtaaaacgactgatgacggtgtctgatggaaagctatca 243
Query: 178 gtgcactttgaggcagtagaagcaagatttcttagagcatctttcagtgcttttctagat 237
|||| |||||||||| |||||| |||||||| | ||||| |||||||||||| |||||
Sbjct: 244 gtgcgctttgaggcaacagaagccagatttctccgggcatcattcagtgcttttgtagat 303
Query: 238 gtcctaacactagctacaaacacaattgaagaatttggtcaaggaatggagttgtga 294
||||| | |||||| || || ||||||||||||||||||| ||||||||||||||||
Sbjct: 304 gtccttatactagccacgaaaacaattgaagaatttggtccaggaatggagttgtga 360