Miyakogusa Predicted Gene
- Lj0g3v0260379.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0260379.1 Non Chatacterized Hit- tr|B9HEU8|B9HEU8_POPTR
Putative uncharacterized protein OS=Populus
trichocarp,43.75,0.00000000006, ,CUFF.17160.1
(588 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70565 similar to UniRef100_O49929 Cluster: Pore prote... 1158 0.0
gnl|LJGI|BI420466 similar to UniRef100_O49929 Cluster: Pore prot... 710 0.0
gnl|LJGI|AV771669 weakly similar to UniRef100_O49929 Cluster: Po... 135 3e-31
>gnl|LJGI|TC70565 similar to UniRef100_O49929 Cluster: Pore protein of 24 kD; n=1;
Pisum sativum|Rep: Pore protein of 24 kD - Pisum sativum
(Garden pea), complete
Length = 997
Score = 1158 bits (584), Expect = 0.0
Identities = 587/588 (99%)
Strand = Plus / Plus
Query: 1 atgaaggctgctttgaagggcaggtacgacatcgacaaaaacggtggcgcagccgctacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 atgaaggctgctttgaagggcaggtacgacatcgacaaaaacggtggcgcagccgctacc 133
Query: 61 ctcgccgtcaacgccggcgacgtcaagctcagagcctccataaccgacgccactttcatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 ctcgccgtcaacgccggcgacgtcaagctcagagcctccataaccgacgccactttcatc 193
Query: 121 aacggccccagcttaaccggtttggtcctcgccgtagagaaacctggttccttcataatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 aacggccccagcttaaccggtttggtcctcgccgtagagaaacctggttccttcataatc 253
Query: 181 gactacaatgtccccaaaaaggaccttcggtttcagttcatgaacactgttagggttgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gactacaatgtccccaaaaaggaccttcggtttcagttcatgaacactgttagggttgct 313
Query: 241 gagaagccgttgaatttgacttacattcacagcaaggctgataacaggaccattttggac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gagaagccgttgaatttgacttacattcacagcaaggctgataacaggaccattttggac 373
Query: 301 ggaacgttggtgttcgacgctgccaacaaggtttctgcgaattatgctcttgattcgggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ggaacgttggtgttcgacgctgccaacaaggtttctgcgaattatgctcttgattcgggg 433
Query: 361 aattgcaggttgaagtataggtatgtgcacaagggtttgaccacgtttgaaccttcctat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 aattgcaggttgaagtataggtatgtgcacaagggtttgaccacgtttgaaccttcctat 493
Query: 421 gatgttgctaagaacacgtgggacttcgcagtttcgaggagggtttatggtgatgactcg 480
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 494 gatgttgctaagaacacgtgggacttcgcggtttcgaggagggtttatggtgatgactcg 553
Query: 481 tttggagcatcttacaagacatccagcaaggtgttggggttggagtggtcgcggaattcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tttggagcatcttacaagacatccagcaaggtgttggggttggagtggtcgcggaattcc 613
Query: 541 aaacaaactggttgcttcaagattgtggcgtccgttaacttggctgag 588
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 aaacaaactggttgcttcaagattgtggcgtccgttaacttggctgag 661
>gnl|LJGI|BI420466 similar to UniRef100_O49929 Cluster: Pore protein of 24 kD; n=1;
Pisum sativum|Rep: Pore protein of 24 kD - Pisum sativum
(Garden pea), partial (65%)
Length = 451
Score = 710 bits (358), Expect = 0.0
Identities = 407/422 (96%), Gaps = 1/422 (0%)
Strand = Plus / Plus
Query: 1 atgaaggctgctttgaagggcaggtacgacatcgacaaaaacggtggcgcagccgctacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30 atgaaggctgctttgaagggcaggtacgacatcgacaaaaacggtggcgcagccgctacc 89
Query: 61 ctcgccgtcaacgccggcgacgtcaagctcagagcctccataaccgacgccactttcatc 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 90 ctcgccgtcaacgccttttttttcaagctcagagcctccataaccgacgccactttcatc 149
Query: 121 aacggcccc-agcttaaccggtttggtcctcgccgtagagaaacctggttccttcataat 179
|| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 aattttttttagcttaaccggtttggtcctcgccgtagagaaacctggttccttcataat 209
Query: 180 cgactacaatgtccccaaaaaggaccttcggtttcagttcatgaacactgttagggttgc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 cgactacaatgtccccaaaaaggaccttcggtttcagttcatgaacactgttagggttgc 269
Query: 240 tgagaagccgttgaatttgacttacattcacagcaaggctgataacaggaccattttgga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tgagaagccgttgaatttgacttacattcacagcaaggctgataacaggaccattttgga 329
Query: 300 cggaacgttggtgttcgacgctgccaacaaggtttctgcgaattatgctcttgattcggg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 cggaacgttggtgttcgacgctgccaacaaggtttctgcgaattatgctcttgattcggg 389
Query: 360 gaattgcaggttgaagtataggtatgtgcacaagggtttgaccacgtttgaaccttccta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gaattgcaggttgaagtataggtatgtgcacaagggtttgaccacgtttgaaccttccta 449
Query: 420 tg 421
||
Sbjct: 450 tg 451
>gnl|LJGI|AV771669 weakly similar to UniRef100_O49929 Cluster: Pore protein of 24 kD;
n=1; Pisum sativum|Rep: Pore protein of 24 kD - Pisum
sativum (Garden pea), partial (11%)
Length = 394
Score = 135 bits (68), Expect = 3e-31
Identities = 124/139 (89%), Gaps = 4/139 (2%)
Strand = Plus / Minus
Query: 454 tcgaggagggtttatggtgatgactcgtttggagcatcttacaagacatccagcaaggtg 513
||||||||||||||||||||||||||||||||||||| || | |||||||| || | |
Sbjct: 394 tcgaggagggtttatggtgatgactcgtttggagcatgttcccagacatcccccaggctc 335
Query: 514 ttggggttggagtggtcgcgga-attccaaa--caaactggttgcttcaagattgtggcg 570
|||||||||||||||||||||| ||||| || | | |||||||||||||||||||||||
Sbjct: 334 ttggggttggagtggtcgcggagattcccaaccccacctggttgcttcaagattgtggcg 275
Query: 571 tccg-ttaacttggctgag 588
|||| ||||||||||||||
Sbjct: 274 tccgcttaacttggctgag 256