Miyakogusa Predicted Gene

Lj0g3v0258129.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0258129.1 Non Chatacterized Hit- tr|I1L502|I1L502_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,44.55,5e-18,JUMONJI
DOMAIN CONTAINING PROTEIN,NULL; Clavaminate synthase-like,NULL; Small
domain found in the ju,gene.g20120.t1.1
         (1050 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW594531                                                     256   2e-67
gnl|LJGI|TC61539 similar to UniRef100_A7PC31 Cluster: Chromosome...    60   3e-08

>gnl|LJGI|BW594531 
          Length = 474

 Score =  256 bits (129), Expect = 2e-67
 Identities = 132/133 (99%)
 Strand = Plus / Minus

                                                                       
Query: 335 aaaatgagttctggcatgacatggttcatggagacagaggaacagttgaatatggagtca 394
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 aaaatgagttctggcatgacatggttcatggagacagaggaacagttgaatatggagtca 415

                                                                       
Query: 395 acgttgagggcagtgccttttcaagtgatcccaatgacaggcttggaacaagcaaatgga 454
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 acgttgagggcagtgccttttcaagtgatcccaatgacaggcttggaacaagcaaatgga 355

                        
Query: 455 atttgaagatctt 467
           |||||||| ||||
Sbjct: 354 atttgaaggtctt 342


>gnl|LJGI|TC61539 similar to UniRef100_A7PC31 Cluster: Chromosome chr2 scaffold_11,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_11, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (12%)
          Length = 773

 Score = 60.0 bits (30), Expect = 3e-08
 Identities = 60/70 (85%)
 Strand = Plus / Plus

                                                                       
Query: 101 atcctttagtttatctacagaagattgctcctgaggcttcaaaatatggtatatgcaaaa 160
           |||||||| ||||| | || || || |||||||| ||||| |||||||| |||||||| |
Sbjct: 664 atcctttaatttatttgcaaaaaatagctcctgaagcttctaaatatggcatatgcaaga 723

                     
Query: 161 ttgtttcacc 170
           ||||||||||
Sbjct: 724 ttgtttcacc 733