Miyakogusa Predicted Gene
- Lj0g3v0256839.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0256839.2 Non Chatacterized Hit- tr|I1KKA0|I1KKA0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.41362 PE,82.78,0,no
description,NULL; no description,Nucleic acid-binding, OB-fold;
coiled-coil,NULL; Dual specificit,CUFF.16871.2
(1983 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC596730 similar to UniRef100_UPI000034F06B Cluster: mR... 438 e-122
gnl|LJGI|TC73504 similar to UniRef100_UPI000034F06B Cluster: mRN... 341 1e-92
gnl|LJGI|FS325170 similar to UniRef100_A7PP02 Cluster: Chromosom... 295 5e-79
gnl|LJGI|BP057660 similar to UniRef100_UPI000034F06B Cluster: mR... 182 6e-45
gnl|LJGI|TC68855 similar to UniRef100_A7PP04 Cluster: Chromosome... 178 9e-44
gnl|LJGI|TC79773 similar to UniRef100_A7PP04 Cluster: Chromosome... 58 2e-07
gnl|LJGI|TC61745 similar to UniRef100_A7PH52 Cluster: Chromosome... 58 2e-07
gnl|LJGI|TC70128 similar to UniRef100_A7PP04 Cluster: Chromosome... 56 9e-07
gnl|LJGI|BP084816 similar to UniRef100_Q2R8T5 Cluster: MRNA capp... 54 3e-06
>gnl|LJGI|DC596730 similar to UniRef100_UPI000034F06B Cluster: mRNA capping enzyme
family protein; n=1; Arabidopsis thaliana|Rep: mRNA
capping enzyme family protein - Arabidopsis thaliana,
partial (25%)
Length = 578
Score = 438 bits (221), Expect = e-122
Identities = 440/513 (85%)
Strand = Plus / Plus
Query: 930 aatgacaaatgatgatgttttgggagatgagatacctactgatcagcaagatgcatttcg 989
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||
Sbjct: 57 aatgacaaatgatgatgttttaggagatgagatacctgctgatcagcaagatgcacttcg 116
Query: 990 acagttttgctttaaaacgcttaaattgggtgttggggctagaggacaaatgcattttcc 1049
|||||| || | | |||| ||||||||||||| |||||| |||||||| | || |||||
Sbjct: 117 acagttctgttatcaaacacttaaattgggtgctggggccagaggacatacacaatttcc 176
Query: 1050 tgggtcgcaccctgtttctctaaacagggataatttacagctgttacgacagcgttatta 1109
|| || ||||| |||||||| |||||||||||||| ||| |||||||||| || |||||
Sbjct: 177 aggttcacacccagtttctctcaacagggataatttgcagttgttacgacaacgctatta 236
Query: 1110 ttatgctacgtggaaagccgatggaacaagatatatgatgctcataactatggatggatg 1169
|||||| || ||||| || ||||| ||| ||||||||||||| ||||| ||||||| ||
Sbjct: 237 ttatgcaacatggaaggctgatggtacacgatatatgatgctaataacattggatgggtg 296
Query: 1170 ttacttgattgatagaaactttaattttcgaagggtccaaatgaggtttccttgcagggt 1229
|| |||||| |||||||| |||||||||||||||||||| ||||| ||||||||||||
Sbjct: 297 tttcttgatagatagaaattttaattttcgaagggtccagatgagatttccttgcaggag 356
Query: 1230 taaaaatgatggcttgccagagaaaactcaccacttcacattacttgatggggagatgat 1289
|| ||||||||||||| ||||| || ||||| ||||||||||||||||| |||||| |
Sbjct: 357 tacaaatgatggcttgggcgagaagacccaccaattcacattacttgatggtgagatggt 416
Query: 1290 tattgatacagtaccagattcaagaaagcaggaaaggagatacctcatttatgatctgat 1349
||||||||| | ||||||||| |||||||| || |||||||| || |||||| ||||
Sbjct: 417 tattgataccttgccagattcacagaagcaggagagaagataccttatatatgatatgat 476
Query: 1350 ggcagtcaaccgtgcatcagtaatagagcgacctttctacgaacggtggaagatgctaga 1409
|||| |||||| | |||| ||||||||||||| ||||| ||||||||||||||||| ||
Sbjct: 477 ggcaatcaaccacgtatcaataatagagcgacccttctatgaacggtggaagatgcttga 536
Query: 1410 gaaggaagtaattgaccccaggaatcaggaacg 1442
||||||||| ||||| || ||||| || |||||
Sbjct: 537 gaaggaagtgattgaacctaggaaccatgaacg 569
>gnl|LJGI|TC73504 similar to UniRef100_UPI000034F06B Cluster: mRNA capping enzyme
family protein; n=1; Arabidopsis thaliana|Rep: mRNA
capping enzyme family protein - Arabidopsis thaliana,
partial (10%)
Length = 582
Score = 341 bits (172), Expect = 1e-92
Identities = 175/176 (99%)
Strand = Plus / Plus
Query: 1808 cttgggattctgacaaacagaaatggatattcaaacgagtcagaacagataagtcaactc 1867
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttgggattctgactaacagaaatggatattcaaacgagtcagaacagataagtcaactc 60
Query: 1868 caaatgactttaatacatacaagaaggtgatgcaaagtataaaagacaatatcacagagg 1927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caaatgactttaatacatacaagaaggtgatgcaaagtataaaagacaatatcacagagg 120
Query: 1928 atatcctgttgaatgaaataaacgagataattcgccttcccatgtatgctgacagg 1983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atatcctgttgaatgaaataaacgagataattcgccttcccatgtatgctgacagg 176
>gnl|LJGI|FS325170 similar to UniRef100_A7PP02 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 812
Score = 295 bits (149), Expect = 5e-79
Identities = 287/333 (86%)
Strand = Plus / Plus
Query: 113 gtgaagaaagtaagagacgattgaagagagaacgttcagattacagacctgtgcaagcat 172
|||||||||| |||||||| |||||| |||||||||||||| ||||||| |||||| ||
Sbjct: 480 gtgaagaaagaaagagacggttgaagcgagaacgttcagatgacagacccatgcaagtat 539
Query: 173 cacagtcacctggacatgatcagccattccattcaaagatccataaatcctatgatagaa 232
| |||||| | ||| |||||| |||||| ||| | ||||||| |||| ||||||| ||
Sbjct: 540 ctcagtcaaccggatatgatccgccatttcatactaagatccttaaacaatatgatacaa 599
Query: 233 gtaagcttcccccaggttggttggattgccctccatttggcctggaaattttttgcatga 292
||| ||||| || || ||||||||||| ||| ||||||||| |||||||| || |||||
Sbjct: 600 gtagacttcctccgggatggttggattgtccttcatttggccaggaaatttgtttcatga 659
Query: 293 taccttctaaggttcctcttggtgaatcattcaatgaatatattgttcctggtaaaagat 352
||||||| |||||||| ||||||||| ||| |||||| | | ||| ||||||||||||||
Sbjct: 660 taccttccaaggttccacttggtgaagcatacaatgattgtgttgctcctggtaaaagat 719
Query: 353 actcatttaaacaagtgatacatcaacagagagttttagggagaaaacttggtctggtga 412
|||||||||||||||||||||| | |||||||||||||| |||||||||||||| ||||
Sbjct: 720 actcatttaaacaagtgatacacaaccagagagttttaggcagaaaacttggtcttgtga 779
Query: 413 ttgatttgacgaatacttctagatactatccag 445
|||||||||||||||| || ||||||||||||
Sbjct: 780 ttgatttgacgaatacctcccgatactatccag 812
Score = 54.0 bits (27), Expect = 3e-06
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 14 tggacttgaatgccttgcctgtgccggaggaagatgaagattctattgagg 64
||||||||||||||| ||| || || ||||||||||||||| || ||||||
Sbjct: 354 tggacttgaatgcctcgccggtccctgaggaagatgaagatacttttgagg 404
>gnl|LJGI|BP057660 similar to UniRef100_UPI000034F06B Cluster: mRNA capping enzyme
family protein; n=1; Arabidopsis thaliana|Rep: mRNA
capping enzyme family protein - Arabidopsis thaliana,
partial (6%)
Length = 499
Score = 182 bits (92), Expect = 6e-45
Identities = 92/92 (100%)
Strand = Plus / Minus
Query: 1892 aggtgatgcaaagtataaaagacaatatcacagaggatatcctgttgaatgaaataaacg 1951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 aggtgatgcaaagtataaaagacaatatcacagaggatatcctgttgaatgaaataaacg 372
Query: 1952 agataattcgccttcccatgtatgctgacagg 1983
||||||||||||||||||||||||||||||||
Sbjct: 371 agataattcgccttcccatgtatgctgacagg 340
Score = 137 bits (69), Expect = 3e-31
Identities = 69/69 (100%)
Strand = Plus / Minus
Query: 1788 tgaaaagatcatagagtgttcttgggattctgacaaacagaaatggatattcaaacgagt 1847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tgaaaagatcatagagtgttcttgggattctgacaaacagaaatggatattcaaacgagt 440
Query: 1848 cagaacaga 1856
|||||||||
Sbjct: 439 cagaacaga 431
>gnl|LJGI|TC68855 similar to UniRef100_A7PP04 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 809
Score = 178 bits (90), Expect = 9e-44
Identities = 267/326 (81%)
Strand = Plus / Plus
Query: 1658 attcagttgattttctttttgagattgtcgatggtcgtcaactactttttctctatgaac 1717
|||||||||||||||| |||||| ||| | || |||| | ||||||||||||||||| |
Sbjct: 1 attcagttgattttctatttgaggttgatggtgatcgtgagctactttttctctatgagc 60
Query: 1718 gaggaaaaaggaaactcatggaagggtgtggggttgcattcgaagaaggttcagacccct 1777
| ||||| | |||||||||||| || | ||||| |||||| ||| | ||||| ||||
Sbjct: 61 gtggaaagaagaaactcatggacggaaatagggttacattcggagatgactcagatccct 120
Query: 1778 tgctgtattctgaaaagatcatagagtgttcttgggattctgacaaacagaaatggatat 1837
| ||| ||| |||||||||||||||||| ||||||| ||| ||| | |||||| ||
Sbjct: 121 cagtttatgctggaaagatcatagagtgttcctgggattttgatgaactggaatggaaat 180
Query: 1838 tcaaacgagtcagaacagataagtcaactccaaatgactttaatacatacaagaaggtga 1897
|| |||||||| |||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 181 tcttgcgagtcaggacagataaatcaactccaaatgagtttaatacatacaagaaggtga 240
Query: 1898 tgcaaagtataaaagacaatatcacagaggatatcctgttgaatgaaataaacgagataa 1957
||| ||| |||| |||||| || || ||||| | | |||||||||||| | |||||||
Sbjct: 241 tgcgaagcataagagacaacattacggaggaggacttattgaatgaaatagatgagataa 300
Query: 1958 ttcgccttcccatgtatgctgacagg 1983
| || || || |||||||||||||||
Sbjct: 301 tccggctgcctatgtatgctgacagg 326
>gnl|LJGI|TC79773 similar to UniRef100_A7PP04 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 482
Score = 58.0 bits (29), Expect = 2e-07
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 1486 ttcagggtgaggaggaaagatttttggctgctctctactgtcacaaaacttctaaaagaa 1545
|||| ||||||||||| |||||||||| |||||| |||||| ||||| || |||| |||
Sbjct: 221 ttcaaggtgaggaggacagatttttggatgctctttactgttacaaagctcataaaggaa 280
Query: 1546 ttcat 1550
|||||
Sbjct: 281 ttcat 285
>gnl|LJGI|TC61745 similar to UniRef100_A7PH52 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 862
Score = 58.0 bits (29), Expect = 2e-07
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 1486 ttcagggtgaggaggaaagatttttggctgctctctactgtcacaaaacttctaaaagaa 1545
|||| ||||||||||| |||||||||| |||||| |||||| ||||| || |||| |||
Sbjct: 722 ttcaaggtgaggaggacagatttttggatgctctttactgttacaaagctcataaaggaa 781
Query: 1546 ttcat 1550
|||||
Sbjct: 782 ttcat 786
>gnl|LJGI|TC70128 similar to UniRef100_A7PP04 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 633
Score = 56.0 bits (28), Expect = 9e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 1491 ggtgaggaggaaagatttttggctgctctctactgtcacaaaacttctaaaagaattcat 1550
|||| ||||||||||||||| | ||||||||||| ||||||| ||| |||| || |||||
Sbjct: 52 ggtggggaggaaagattttttgttgctctctactatcacaaagcttttaaaggagttcat 111
>gnl|LJGI|BP084816 similar to UniRef100_Q2R8T5 Cluster: MRNA capping enzyme, C-terminal
domain containing protein, expressed; n=1; Oryza sativa
Japonica Group|Rep: MRNA capping enzyme, C-terminal
domain containing protein, expressed - Oryza sativa
subsp. japonica (Rice), partial (3%)
Length = 359
Score = 54.0 bits (27), Expect = 3e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1486 ttcagggtgaggaggaaagatttttggctgctctctactgtcacaaa 1532
|||| ||||||||||| | |||||||| |||||| ||||||||||||
Sbjct: 207 ttcaaggtgaggaggacatatttttggatgctctttactgtcacaaa 253