Miyakogusa Predicted Gene
- Lj0g3v0253989.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0253989.2 tr|G7LDU7|G7LDU7_MEDTR Phospholipid-transporting
ATPase OS=Medicago truncatula GN=MTR_8g062150 PE=4 ,92.83,0,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,ATPase, P-type,
phospholipid-translocating, flippase; HAD,CUFF.16667.2
(963 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC593717 similar to UniRef100_A7QX90 Cluster: Chromosom... 599 e-170
gnl|LJGI|BW595505 similar to UniRef100_A7QX90 Cluster: Chromosom... 507 e-143
gnl|LJGI|TC70471 homologue to UniRef100_A2Q4V6 Cluster: Ribosoma... 62 7e-09
>gnl|LJGI|DC593717 similar to UniRef100_A7QX90 Cluster: Chromosome undetermined
scaffold_215, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_215,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (14%)
Length = 590
Score = 599 bits (302), Expect = e-170
Identities = 495/562 (88%)
Strand = Plus / Plus
Query: 402 tggtagcactgcaatagaagacaagcttcaagaaggagtgcctgcttgcattgaaactct 461
|||||||||||| ||||| |||||||||||||| ||||| || || ||||| || | |||
Sbjct: 1 tggtagcactgccatagaggacaagcttcaagatggagtaccagcctgcatagatattct 60
Query: 462 tcaaagagctggtattaaaatttgggttctaacaggggacaaggttgaaacagcaattaa 521
|||||||||||| |||||||||||||| || |||||||||||| ||||||||||||||||
Sbjct: 61 tcaaagagctggcattaaaatttgggtgctcacaggggacaagattgaaacagcaattaa 120
Query: 522 catagcctatgcatgcaatttaataaacaatgagatgaagcaatttgttatcagttcaga 581
|| |||| |||||||||||||||||||||| ||||||| || ||| |||||||||||||
Sbjct: 121 tattgcctgtgcatgcaatttaataaacaataagatgaaacagtttattatcagttcaga 180
Query: 582 aactgatgcaattagagaagttgaagacaggggtgaccaagtggagattgcacgatttat 641
||||||||||||||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 181 aactgatgcaattagagaagttgaagacaggggggaccaagtagaaattgcacggtttat 240
Query: 642 taaggaagaagtgaaaaaagaactgaaaaggtgccttgaggaagcacagagctattttca 701
||| ||||||||||| ||||||||||| | |||| |||| |||||| | ||| |||||
Sbjct: 241 taaagaagaagtgaagaaagaactgaagaagtgctttgaagaagcaaaaagccattttag 300
Query: 702 ctccttatctggaccaaaactggcacttgtaattgatggaaagtgtctaatgtatgcatt 761
||| |||||||||||||| | |||||||||||||||||||| |||||||||||||||||
Sbjct: 301 ctctctatctggaccaaaattagcacttgtaattgatggaaaatgtctaatgtatgcatt 360
Query: 762 ggatccaagtttaagagtgatgctgctgaattttagtttgaattgtcatgctgttgtttg 821
|||||| ||||| |||| |||||||||||||| ||||||||||||||| | ||||||||
Sbjct: 361 ggatcctagtttgcgagtcatgctgctgaatttgagtttgaattgtcatacagttgtttg 420
Query: 822 ctgccgagtttctcctttacagaaagcgcaggtcacaagtatggttaagaaaggtgcnnn 881
|||||| |||||||||||||||||||| |||||||| || |||| |||||||||||
Sbjct: 421 ctgccgcgtttctcctttacagaaagcacaggtcacgcgtttggtcaagaaaggtgcaca 480
Query: 882 nnnnntaactcttagtattggtgatggagccaatgatgtaagcatgattcaagcagctca 941
|||| ||||||||||||||||||||||||||||| |||||||| ||||| |||||
Sbjct: 481 aaaaataacacttagtattggtgatggagccaatgatgttagcatgatccaagctgctca 540
Query: 942 tgttggtgttggcataagtgga 963
|||||| ||||| |||||||||
Sbjct: 541 tgttggcgttgggataagtgga 562
>gnl|LJGI|BW595505 similar to UniRef100_A7QX90 Cluster: Chromosome undetermined
scaffold_215, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_215,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (9%)
Length = 481
Score = 507 bits (256), Expect = e-143
Identities = 272/280 (97%)
Strand = Plus / Plus
Query: 684 agcacagagctattttcactccttatctggaccaaaactggcacttgtaattgatggaaa 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 agcacagagctattttcactccttatctggaccaaaactggcacttgtaattgatggaaa 64
Query: 744 gtgtctaatgtatgcattggatccaagtttaagagtgatgctgctgaattttagtttgaa 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gtgtctaatgtatgcattggatccaagtttaagagtgatgctgctgaattttagtttgaa 124
Query: 804 ttgtcatgctgttgtttgctgccgagtttctcctttacagaaagcgcaggtcacaagtat 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ttgtcatgctgttgtttgctgccgagtttctcctttacagaaagcgcaggtcacaagtat 184
Query: 864 ggttaagaaaggtgcnnnnnnnntaactcttagtattggtgatggagccaatgatgtaag 923
||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 185 ggttaagaaaggtgcaaaaaaaataactcttagtattggtgatggagccaatgatgtaag 244
Query: 924 catgattcaagcagctcatgttggtgttggcataagtgga 963
||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 catgattcaagcagctcatgttggtgttggcataagtgga 284
>gnl|LJGI|TC70471 homologue to UniRef100_A2Q4V6 Cluster: Ribosomal protein S10,
eukaryotic and archaeal form; n=1; Medicago
truncatula|Rep: Ribosomal protein S10, eukaryotic and
archaeal form - Medicago truncatula (Barrel medic),
partial (34%)
Length = 662
Score = 61.9 bits (31), Expect = 7e-09
Identities = 88/107 (82%)
Strand = Plus / Plus
Query: 367 gtggcagaactcatagaaaaagatctcgttttaattggtagcactgcaatagaagacaag 426
||||||||||| ||||||| ||||| |||||| | | |||||| | | ||||||||||
Sbjct: 411 gtggcagaacttatagaaactgatcttattttaactagcagcactcccacagaagacaag 470
Query: 427 cttcaagaaggagtgcctgcttgcattgaaactcttcaaagagctgg 473
|||||||| ||||| | |||||||| || | ||| |||||||||||
Sbjct: 471 cttcaagatggagtacgggcttgcatagatattctacaaagagctgg 517