Miyakogusa Predicted Gene
- Lj0g3v0234519.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0234519.1 Non Chatacterized Hit- tr|I1JV27|I1JV27_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.34450
PE,85.45,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
Rhamnogal_lyase,Rhamnogalacturonate lyase,CUFF.15339.1
(2028 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP041804 similar to UniRef100_A7NUJ3 Cluster: Chromosom... 918 0.0
gnl|LJGI|TC70229 similar to UniRef100_A7NUJ3 Cluster: Chromosome... 80 6e-14
gnl|LJGI|FS328914 similar to UniRef100_A7NUJ3 Cluster: Chromosom... 72 2e-11
>gnl|LJGI|BP041804 similar to UniRef100_A7NUJ3 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 533
Score = 918 bits (463), Expect = 0.0
Identities = 466/467 (99%)
Strand = Plus / Minus
Query: 1562 atgaagacttagtttacacggttggcactagtgactacagcaaagattggttttttgctc 1621
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 533 atgaagacttagtttacacggtgggcactagtgactacagcaaagattggttttttgctc 474
Query: 1622 aagttaccaggaagaaagacaataacacataccaaggtaccacatggaagattaatttca 1681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 aagttaccaggaagaaagacaataacacataccaaggtaccacatggaagattaatttca 414
Query: 1682 atcttgactatgtgaataccagtggaacttacaaattgagactagctctggcttctgttc 1741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 atcttgactatgtgaataccagtggaacttacaaattgagactagctctggcttctgttc 354
Query: 1742 atgctgctgagctacagattcggataaacaactcagaagcaaatccacctttattttcta 1801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 atgctgctgagctacagattcggataaacaactcagaagcaaatccacctttattttcta 294
Query: 1802 gtggagtaattggaaaagagaataccatagccagacatggaattcatggactctactggc 1861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 gtggagtaattggaaaagagaataccatagccagacatggaattcatggactctactggc 234
Query: 1862 tattcagcattgatgtgcaaggaactcttcttgtgcaggggaataataccatctttctaa 1921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 tattcagcattgatgtgcaaggaactcttcttgtgcaggggaataataccatctttctaa 174
Query: 1922 cccaaacacaaaacataagtccttttcaaggaattttgtatgattatattcgtttagaag 1981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 cccaaacacaaaacataagtccttttcaaggaattttgtatgattatattcgtttagaag 114
Query: 1982 gtcccccttatgtaaattatgaagacaaaaactcgacatttttgtga 2028
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 gtcccccttatgtaaattatgaagacaaaaactcgacatttttgtga 67
>gnl|LJGI|TC70229 similar to UniRef100_A7NUJ3 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 826
Score = 79.8 bits (40), Expect = 6e-14
Identities = 187/236 (79%)
Strand = Plus / Plus
Query: 1387 tatgagccaccaagagatggcccaacattgtgggaaataggcatccctgatcgctcagct 1446
|||||||| ||||||||||| || ||||||||||||||||| || |||||| | || |||
Sbjct: 4 tatgagcctccaagagatggtcccacattgtgggaaataggtattcctgatagatctgct 63
Query: 1447 gctgagttctatgttcctgatccaaatcccaaatatgtcaacaaactctatgttaatcat 1506
|| || || || ||||||||||| ||||| ||||| | || || || | | | ||||
Sbjct: 64 gcagaattttacgttcctgatcccaatccacaatatattaataagctttttatcggtcat 123
Query: 1507 cctgacaagtttaggcaatatggcttgtgggagagatatgctgatttgtacccaaatgaa 1566
|| |||| || ||||| ||||| |||||||| |||||| | || ||||| || ||| |
Sbjct: 124 ccagacagattcaggcagtatggattgtgggacagatatacagaattgtatcctgatgca 183
Query: 1567 gacttagtttacacggttggcactagtgactacagcaaagattggttttttgctca 1622
|| || |||||||| |||| ||||||||| || || |||||||||||||||||
Sbjct: 184 gatttggtttacacaattggtgttagtgactataggaaggattggttttttgctca 239
>gnl|LJGI|FS328914 similar to UniRef100_A7NUJ3 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 753
Score = 71.9 bits (36), Expect = 2e-11
Identities = 117/144 (81%)
Strand = Plus / Plus
Query: 100 catgtggtgatggacaatggcatagtccaggtaaccttatccaatcctgaaggaattgtc 159
|||||||||||||| |||||||||||||| || || || || |||||||| ||||| |||
Sbjct: 161 catgtggtgatggataatggcatagtccaagttacgttgtcaaatcctgatggaatcgtc 220
Query: 160 accggaattcaatacaatggggtggacaatttgctggaagttcttaaccctgaagctgac 219
|| || || | ||| ||||| || || ||||| || |||||||| ||| ||| || |
Sbjct: 221 actggtatacgatataatggtgttgataatttacttgaagttctcaacaaggaatctaat 280
Query: 220 agagggtactgggacattgtttgg 243
|||||||||||||| ||||||||
Sbjct: 281 agagggtactgggatcttgtttgg 304