Miyakogusa Predicted Gene

Lj0g3v0231269.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0231269.1 tr|Q8S9I4|Q8S9I4_ARATH AT4g02720/T10P11_1
OS=Arabidopsis thaliana GN=At4g02720 PE=2 SV=1,58.14,2e-18,seg,NULL;
NF-KAPPA B ACTIVATING PROTEIN,Protein of unknown function DUF926;
SynMuv_product,Protein o,CUFF.15245.1
         (1390 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71191 similar to UniRef100_A7PUB5 Cluster: Chromosome...   892   0.0  
gnl|LJGI|TC77414 homologue to UniRef100_A7PUB5 Cluster: Chromoso...   274   1e-72
gnl|LJGI|TC65361 homologue to UniRef100_A7PUB5 Cluster: Chromoso...   141   1e-32

>gnl|LJGI|TC71191 similar to UniRef100_A7PUB5 Cluster: Chromosome chr7 scaffold_31,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_31, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (11%)
          Length = 577

 Score =  892 bits (450), Expect = 0.0
 Identities = 473/478 (98%), Gaps = 2/478 (0%)
 Strand = Plus / Plus

                                                                       
Query: 100 agtcctaactacgactcctatgaccgccgccaccgtcgccgctctcaatctcccagaccc 159
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 agtcctaactacgactcctatgaccgccgccaccgtcgccgctctcaatctcccagaccc 159

                                                                       
Query: 160 cgaagccctaggcacaccaacggaaacacaaacgacaa-cgccctgccgaaaaaattcgg 218
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 160 cgaagccctaggcacaccaacggaaacacaaacgacaagcgccctgccgaaaaaattcgg 219

                                                                       
Query: 219 ccgccgtaacggctcgtatctggaccgcgacggcaaggactggcagcgctcggaatcgga 278
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 ccgccgtaacggctcgtatctggaccgcgacggcaaggactggcagcgctcggaatcgga 279

                                                                       
Query: 279 gtctgacgaggagttgaaaggcctgagtttcgaggaatatcggaggctcaagaggcagaa 338
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 gtctgacgaggagtggaaaggcctgagtttcgaggaatatcggaggctcaagaggcagaa 339

                                                                       
Query: 339 gatgaggaaggcgctgaagcactgtatctggaacgttacgccaagtcc-tccaaggaacg 397
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 340 gatgaggaaggcgctgaagcactgtatctggaacgttacgccaagtccgtccaaggaacg 399

                                                                       
Query: 398 agaacgaggatgcggaagatgatttcaaagccgaagaggttcctgagaaattcggagatg 457
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 agaacgaggatgcggaagatgatttcaaagccgaagaggttcctgagaaattcggagatg 459

                                                                       
Query: 458 gcggtgatttgaagatcgagaaggaggttaaacctagggcaaaatctgaatctgcatctg 517
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 460 gcggtgatttgaagatcgagaaggaggttaaaccaagggcaaaatctgaatctgcatctg 519

                                                                     
Query: 518 agaaatcgtcaggtagcgaatcggaaagtgaattggaatcagatgattcgcgttcgag 575
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 520 agaaatcgtcaggtagcgaatcggaaagtgaatcggaatcagatgattcgcgttcgag 577


>gnl|LJGI|TC77414 homologue to UniRef100_A7PUB5 Cluster: Chromosome chr7 scaffold_31,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr7 scaffold_31, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (18%)
          Length = 537

 Score =  274 bits (138), Expect = 1e-72
 Identities = 138/138 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1253 atgttcaacaagggaaacgtattcctcgtagaggagaagtgggtctttctgcggacgaga 1312
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    atgttcaacaagggaaacgtattcctcgtagaggagaagtgggtctttctgcggacgaga 60

                                                                        
Query: 1313 ttcagaaatttgagagccttggttatgtgatgagtggtagcaggcatcagaggatgaatg 1372
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   ttcagaaatttgagagccttggttatgtgatgagtggtagcaggcatcagaggatgaatg 120

                              
Query: 1373 ccattcgtattaggaaag 1390
            ||||||||||||||||||
Sbjct: 121  ccattcgtattaggaaag 138


>gnl|LJGI|TC65361 homologue to UniRef100_A7PUB5 Cluster: Chromosome chr7 scaffold_31,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr7 scaffold_31, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (14%)
          Length = 932

 Score =  141 bits (71), Expect = 1e-32
 Identities = 71/71 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1320 atttgagagccttggttatgtgatgagtggtagcaggcatcagaggatgaatgccattcg 1379
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2    atttgagagccttggttatgtgatgagtggtagcaggcatcagaggatgaatgccattcg 61

                       
Query: 1380 tattaggaaag 1390
            |||||||||||
Sbjct: 62   tattaggaaag 72