Miyakogusa Predicted Gene

Lj0g3v0209609.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0209609.1 tr|Q52KA1|Q52KA1_ARATH At4g39795 OS=Arabidopsis
thaliana GN=At4g39795 PE=2 SV=1,41.84,2e-19,DUF581,Protein of unknown
function DUF581; seg,NULL,CUFF.13444.1
         (471 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72924 similar to UniRef100_A7NV17 Cluster: Chromosome...   888   0.0  
gnl|LJGI|TC61961 similar to UniRef100_A7NV17 Cluster: Chromosome...   131   4e-30

>gnl|LJGI|TC72924 similar to UniRef100_A7NV17 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (66%)
          Length = 596

 Score =  888 bits (448), Expect = 0.0
 Identities = 465/471 (98%), Gaps = 6/471 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgttgctagggaagagacctcgtcctccaatgaagagaaccacaagcatgtctgagata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 atgttgctagggaagagacctcgtcctccaatgaagagaaccacaagcatgtctgagata 177

                                                                       
Query: 61  accttggatctgaacaccaccacggttgtcaccaccgatgttagatccggtggcggtggc 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||      |||
Sbjct: 178 accttggatctgaacaccaccacggttgtcaccaccgatgttagatccggt------ggc 231

                                                                       
Query: 121 ggcggcagtggtgggttcaataatgggttagatcagaccaaggttttggctccagttcca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 ggcggcagtggtgggttcaataatgggttagatcagaccaaggttttggctccagttcca 291

                                                                       
Query: 181 cccagaaaccatagaaggcattcctctgatttcacagggactcctgatttcttgcgctct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 cccagaaaccatagaaggcattcctctgatttcacagggactcctgatttcttgcgctct 351

                                                                       
Query: 241 tgctgtctctgcagacgccgtctcgtaccaggtcgtgacatctacatgtacaggggtgat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tgctgtctctgcagacgccgtctcgtaccaggtcgtgacatctacatgtacaggggtgat 411

                                                                       
Query: 301 agtgctttctgcagcctcgagtgtcgtcagcagcagatgaagcaagatgagagaaaagag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 agtgctttctgcagcctcgagtgtcgtcagcagcagatgaagcaagatgagagaaaagag 471

                                                                       
Query: 361 aagcttttggtggcatcagccaagaaacaagttgtggcggctccagcttcatctggttct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 aagcttttggtggcatcagccaagaaacaagttgtggcggctccagcttcatctggttct 531

                                                              
Query: 421 caagtcaccaacaccgccagcaaaggcgaaacaacagtggctgctttgtaa 471
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 caagtcaccaacaccgccagcaaaggcgaaacaacagtggctgctttgtaa 582


>gnl|LJGI|TC61961 similar to UniRef100_A7NV17 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (53%)
          Length = 753

 Score =  131 bits (66), Expect = 4e-30
 Identities = 149/176 (84%), Gaps = 3/176 (1%)
 Strand = Plus / Plus

                                                                       
Query: 223 cctgatttcttgcgctcttgctgtctctgcagacgccgtctcgtaccaggtcgtgacatc 282
           |||||||||||||| | |||||  ||||| | ||||||| | |  || || |||||||||
Sbjct: 431 cctgatttcttgcgttgttgcttcctctgtaaacgccgtttggctcctggccgtgacatc 490

                                                                       
Query: 283 tacatgtacaggggtgatagtgctttctgcagcctcgagtgtcgtcagcagcagatgaag 342
           ||||||||||||||||||||||| || ||||| || ||||| ||||||||||||||||| 
Sbjct: 491 tacatgtacaggggtgatagtgcattttgcagtctagagtgccgtcagcagcagatgaac 550

                                                                   
Query: 343 caagatgagagaaaagagaagcttttggtggcatcagccaagaaacaagttgtggc 398
           |||||||||||||| || |||  ||  |||||||||   |||||||||||||||||
Sbjct: 551 caagatgagagaaaggataagtgttgtgtggcatca---aagaaacaagttgtggc 603



 Score =  107 bits (54), Expect = 6e-23
 Identities = 66/70 (94%)
 Strand = Plus / Plus

                                                                       
Query: 8   tagggaagagacctcgtcctccaatgaagagaaccacaagcatgtctgagataaccttgg 67
           |||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||| |
Sbjct: 225 tagggaagagacctcgtcctccgatgaagagaaccaccagcatgtcggagataaccttcg 284

                     
Query: 68  atctgaacac 77
           ||||||||||
Sbjct: 285 atctgaacac 294