Miyakogusa Predicted Gene

Lj0g3v0206449.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0206449.2 Non Chatacterized Hit- tr|B6VCR9|B6VCR9_TRIMO
Putative expressed protein (Fragment) OS=Triticum
mono,64.94,3e-18,coiled-coil,NULL; seg,NULL,CUFF.13214.2
         (1389 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70783 similar to UniRef100_A7NXN5 Cluster: Chromosome...   543   e-153

>gnl|LJGI|TC70783 similar to UniRef100_A7NXN5 Cluster: Chromosome chr5 scaffold_2,
            whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
            Chromosome chr5 scaffold_2, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (58%)
          Length = 859

 Score =  543 bits (274), Expect = e-153
 Identities = 274/274 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1116 ggcatctgaatcatctgagtgttcgaggatgaaggagataaacagggagttgtcccgaaa 1175
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ggcatctgaatcatctgagtgttcgaggatgaaggagataaacagggagttgtcccgaaa 60

                                                                        
Query: 1176 acttgaggttcagacacaaagattagagctcttgactgctcaaaacatggttactgaaaa 1235
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   acttgaggttcagacacaaagattagagctcttgactgctcaaaacatggttactgaaaa 120

                                                                        
Query: 1236 tatttcagcaaaagaaccagattctcgtgttatgtatgaaaataccccatatgcagatga 1295
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  tatttcagcaaaagaaccagattctcgtgttatgtatgaaaataccccatatgcagatga 180

                                                                        
Query: 1296 gggtgacgaggtggtggaaagggtgttgggttggattatgaagctgtttcctggtgggcc 1355
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  gggtgacgaggtggtggaaagggtgttgggttggattatgaagctgtttcctggtgggcc 240

                                              
Query: 1356 ttcaaaacgaagaaccagcaagcttctatgattg 1389
            ||||||||||||||||||||||||||||||||||
Sbjct: 241  ttcaaaacgaagaaccagcaagcttctatgattg 274