Miyakogusa Predicted Gene
- Lj0g3v0192349.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0192349.1 CUFF.12169.1
(781 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57589 similar to UniRef100_A7NTI8 Cluster: Chromosome... 1176 0.0
gnl|LJGI|FS318636 similar to UniRef100_A7NTI8 Cluster: Chromosom... 165 5e-40
gnl|LJGI|TC69715 similar to UniRef100_A7NTI8 Cluster: Chromosome... 163 2e-39
gnl|LJGI|TC71965 similar to UniRef100_A7NTI8 Cluster: Chromosome... 96 4e-19
gnl|LJGI|TC71628 weakly similar to UniRef100_A7PV13 Cluster: Chr... 68 9e-11
>gnl|LJGI|TC57589 similar to UniRef100_A7NTI8 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (86%)
Length = 1276
Score = 1176 bits (593), Expect = 0.0
Identities = 627/637 (98%), Gaps = 1/637 (0%)
Strand = Plus / Plus
Query: 146 gcaatccacagcctctccatgtccctcatctccgccgctattttcaccggaacactcgcc 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gcaatccacagcctctccatgtccctcatctccgccgctattttcaccggaacactcgcc 454
Query: 206 tccgccgccgccgagatccgcgacacgcgctggttctggcgccgctccaaa-cccctttt 264
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 455 tccgccgccgccgagatccgcgacacgcgctggttctggcgccgctccaaaacccctttt 514
Query: 265 gaatggctcctctgtttccccctcggaacccgaccctccgggcgcgtgttcttctggtcc 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gaatggctcctctgtttccccctcggaacccgaccctccgggcgcgtgttcttctggtcc 574
Query: 325 tacctctactacctctcgcggttcctccacatggcgaggaccgtgttctgcatcctccgc 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tacctctactacctctcgcggttcctccacatggcgaggaccgtgttctgcatcctccgc 634
Query: 385 cgccgtagattatcattttcccagctcttcaaccactcaatctccaccttcgtctcgttc 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 cgccgtagattatcattttcccagctcttcaaccactcaatctccaccttcgtctcgttc 694
Query: 445 ctctggctcgagtactcgcagtcgtttcaggtgctggcgattctcttcaccacgctcgtg 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 ctctggctcgagtactcgcagtcgtttcaggtgctggcgattctcttcaccacgctcgtg 754
Query: 505 tacgcgcttgtgtatgggtacaggttcgggactgcgattgggtttcgcggcgcgtgcttt 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 tacgcgcttgtgtatgggtacaggttcgggactgcgattgggtttcgcggcgcgtgcttt 814
Query: 565 ccgtttgtgttgaactgccagattgtgttgctgggttgtaacgtggcgtgccatgttggg 624
|||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 815 ccgtttgtgttgaactgccaaattgtgttgctgggttgtaacgtggcgtcccatgttggg 874
Query: 625 gtttttctgctgcatttcttcttcaaaggtgggtgcaatgggattggcgcgtgggtgttc 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 gtttttctgctgcatttcttcttcaaaggtgggtgcaatgggattggcgcgtgggtgttc 934
Query: 685 aactctgttctcaacactgttgtgctgttgctgtttctcaatttctatgtgaggatgtat 744
|||||||||||||||||||||| || |||||||||||||||||||||||| || ||||||
Sbjct: 935 aactctgttctcaacactgttgggcggttgctgtttctcaatttctatgtaagaatgtat 994
Query: 745 gtttttggtaagaggagaaaggttgagtgtgggtgag 781
||||||||||| || | ||||||||||||||||||||
Sbjct: 995 gtttttggtaaaagaaaaaaggttgagtgtgggtgag 1031
Score = 67.9 bits (34), Expect = 9e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 1 atggagccacagccactcatggggctccacgtgg 34
||||||||||||||||||||||||||||||||||
Sbjct: 250 atggagccacagccactcatggggctccacgtgg 283
>gnl|LJGI|FS318636 similar to UniRef100_A7NTI8 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (72%)
Length = 849
Score = 165 bits (83), Expect = 5e-40
Identities = 228/275 (82%), Gaps = 1/275 (0%)
Strand = Plus / Plus
Query: 236 tggttctggcgccgctccaaa-ccccttttgaatggctcctctgtttccccctcggaacc 294
|||||||||||||| || ||| ||||| | | ||||||||||||||||| ||||| ||
Sbjct: 433 tggttctggcgccggtcaaaaacccctctccagtggctcctctgtttccctctcggtaca 492
Query: 295 cgaccctccgggcgcgtgttcttctggtcctacctctactacctctcgcggttcctccac 354
|| |||||||| || || ||||||||||||||| ||| |||||||||||| ||||| |||
Sbjct: 493 cgcccctccggccgagtcttcttctggtcctacgtcttctacctctcgcgcttccttcac 552
Query: 355 atggcgaggaccgtgttctgcatcctccgccgccgtagattatcattttcccagctcttc 414
||| ||||||||| ||| |||||| || || |||| | || | ||||||||||
Sbjct: 553 atgttgaggaccgtcttcgtcatcctacgacgtcgtaagctcgtgttcttccagctcttc 612
Query: 415 aaccactcaatctccaccttcgtctcgttcctctggctcgagtactcgcagtcgtttcag 474
|||||||||||||| ||||| |||||||||||||| || ||||||||||||||||||
Sbjct: 613 taccactcaatctccgccttcacgtcgttcctctggctggaatactcgcagtcgtttcag 672
Query: 475 gtgctggcgattctcttcaccacgctcgtgtacgc 509
|||||||| ||||| ||||| ||||| | ||||||
Sbjct: 673 gtgctggccattctgttcacaacgctggcgtacgc 707
>gnl|LJGI|TC69715 similar to UniRef100_A7NTI8 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 802
Score = 163 bits (82), Expect = 2e-39
Identities = 384/483 (79%), Gaps = 10/483 (2%)
Strand = Plus / Plus
Query: 268 tggctcctctgtttccccctcggaacccgaccctccgggcgcgtgttcttctggtcctac 327
||||||||| ||||||| ||||| || || |||||||| || || |||||||||||||||
Sbjct: 14 tggctcctc-gtttccctctcggtacacgcccctccggccgagtcttcttctggtcctac 72
Query: 328 ctctactacctctcgcggttcctccacatggcgaggaccgtgttctgcatcctccgccgc 387
||| |||||||||||| ||||| |||||| ||||||||| ||| |||||| || ||
Sbjct: 73 gtcttctacctctcgcgcttccttcacatgttgaggaccgtcttcgtcatcctacgacgt 132
Query: 388 cgtagattatcattttcccagctcttcaaccactcaatctccaccttcgtctcgttcctc 447
|||| | || | |||| ||||| |||||||||||||| ||||| |||||||||
Sbjct: 133 cgtaagctcgtgttcttccaggtcttctaccactcaatctccgccttcacgtcgttcctc 192
Query: 448 tggctcgagtactcgcagtcgtttcaggtgctggcgattctcttcaccacgctcgtgtac 507
||||| || |||||||||||||||||||||||||| ||||| ||||| ||||| | ||||
Sbjct: 193 tggctggaatactcgcagtcgtttcaggtgctggccattctgttcacaacgctggcgtac 252
Query: 508 gcgcttgtgtatgggtacaggttcgggactgcgattgggt------ttcgcggcgcgtgc 561
|| | |||| || ||| |||| |||| || | |||| || |||||||||
Sbjct: 253 gccgtcatgtacggttaccggttttggaccgccgtcgggtcgtcggcgcgtggcgcgtgc 312
Query: 562 tttccgtttgtgttgaactgccagattgtgttgctgggttgtaacgtggcgtgccatgtt 621
|| ||| |||||||||| |||||| | | | || |||| || || ||| ||||||||||
Sbjct: 313 ttcccgcttgtgttgaattgccaggtggcgctgttggggtgcaatctggtgtgccatgtt 372
Query: 622 ggggtttttctgctgcatttcttcttcaaaggtgggtgcaatgggattggcgcgtgggtg 681
||||| ||||| ||||| ||||| ||||||||||||||||||||||| || ||||||
Sbjct: 373 ggggtgcttctgatgcat---ttctttaaaggtgggtgcaatgggattggtgcttgggtg 429
Query: 682 ttcaactctgttctcaacactgttgtgctgttgctgtttctcaatttctatgtgaggatg 741
|||| ||||| || ||| || || |||| |||||||||||||| ||||||||| ||
Sbjct: 430 ctcaattctgtgctgaacggtgccgttttgtttctgtttctcaatttttatgtgaggttg 489
Query: 742 tat 744
|||
Sbjct: 490 tat 492
>gnl|LJGI|TC71965 similar to UniRef100_A7NTI8 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (63%)
Length = 771
Score = 95.6 bits (48), Expect = 4e-19
Identities = 172/213 (80%), Gaps = 4/213 (1%)
Strand = Plus / Plus
Query: 146 gcaatccacagcctctccatgtccctcatctccgccgctattttcaccggaacactcgcc 205
||||||||| ||||| ||||||| ||| |||||||| | || ||| |||| || ||| |
Sbjct: 324 gcaatccacggcctcgccatgtcactcctctccgccaccatcttcgccggcacgctcctc 383
Query: 206 tccgccgccgccgagatccgcgacacgcgctggttctggcgccgctccaaa----cccct 261
|| ||||||||||| || |||||||| || ||| | ||||| ||| | | | ||||
Sbjct: 384 tctgccgccgccgaaattcgcgacacacggtggctatggcggcgcacgagaaccacccca 443
Query: 262 tttgaatggctcctctgtttccccctcggaacccgaccctccgggcgcgtgttcttctgg 321
| || ||| ||||||||||||| ||||| ||||| |||||||| || || |||||||||
Sbjct: 444 atggagtggttcctctgtttcccactcgggacccgcccctccggccgtgtcttcttctgg 503
Query: 322 tcctacctctactacctctcgcggttcctccac 354
|||||| ||| ||||||||| ||||||||||||
Sbjct: 504 tcctacatcttctacctctcacggttcctccac 536
>gnl|LJGI|TC71628 weakly similar to UniRef100_A7PV13 Cluster: Chromosome chr4
scaffold_32, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_32, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (47%)
Length = 594
Score = 67.9 bits (34), Expect = 9e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 296 gaccctccgggcgcgtgttcttctggtcctacctctactacctctcgcggttcctccaca 355
|||||||||| || || ||||||||||||||| ||| ||||||||| || ||||||||||
Sbjct: 498 gaccctccggccgtgtcttcttctggtcctacatcttctacctctcccgcttcctccaca 557
Query: 356 tg 357
||
Sbjct: 558 tg 559