Miyakogusa Predicted Gene

Lj0g3v0185899.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0185899.2 tr|A9TLG3|A9TLG3_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,48.31,3e-18,seg,NULL; mTERF,Mitochodrial transcription
termination factor-related; SUBFAMILY NOT NAMED,NULL; CGI,CUFF.11831.2
         (894 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS333559 similar to UniRef100_A7PLS3 Cluster: Chromosom...  1019   0.0  

>gnl|LJGI|FS333559 similar to UniRef100_A7PLS3 Cluster: Chromosome chr14 scaffold_21,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_21, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (22%)
          Length = 547

 Score = 1019 bits (514), Expect = 0.0
 Identities = 525/528 (99%), Gaps = 3/528 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatgaaggctttctcctcatttcaaccgccccagcatttcccttgcacaagatttttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23  atgatgaaggctttctcctcatttcaaccgccccagcatttcccttgcacaagatttttc 82

                                                                       
Query: 61  tcttccattaccactagcaggactcaactttcttttcatgcaaaggctttctattgccag 120
           |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||
Sbjct: 83  tcttccattaccactag---gactcaactttcttttcatgcaaaggctttctattgccag 139

                                                                       
Query: 121 gcaaaatctggcatagatgggtcattgaatttgagagtgatgccacccaccctgttagca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 gcaaaatctggcatagatgggtcattgaatttgagagtgatgccacccaccctgttagca 199

                                                                       
Query: 181 gcagaaaaggaagaagccaaggctgtgttgtgcttgtttttcaagaaacaaggtttgagc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 gcagaaaaggaagaagccaaggctgtgttgtgcttgtttttcaagaaacaaggtttgagc 259

                                                                       
Query: 241 aacgcggttgcagcaagaaccatcaacaagtcagatctttttattgatcatcttgtctca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aacgcggttgcagcaagaaccatcaacaagtcagatctttttattgatcatcttgtctca 319

                                                                       
Query: 301 aagcttcactccaagcacaaatctcgataccttgcagggagagagcttacaactctagag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aagcttcactccaagcacaaatctcgataccttgcagggagagagcttacaactctagag 379

                                                                       
Query: 361 atcagagatgctcttattccttatcttgaatcccttttggaagagcatggcgacgttctg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atcagagatgctcttattccttatcttgaatcccttttggaagagcatggcgacgttctg 439

                                                                       
Query: 421 ggggatttagtggaaagctatccaaacccacccgtgaaagaaaaatcgactttggcaatt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggggatttagtggaaagctatccaaacccacccgtgaaagaaaaatcgactttggcaatt 499

                                                           
Query: 481 cctactactagtaacgtggtagactctaagaagctcaaagctgtgtct 528
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cctactactagtaacgtggtagactctaagaagctcaaagctgtgtct 547