Miyakogusa Predicted Gene
- Lj0g3v0183889.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0183889.1 Non Chatacterized Hit- tr|I3SV38|I3SV38_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.33,0,Homeodomain-like,Homeodomain-like;
HOMEOBOX_2,Homeodomain; ELK,ELK; no
description,Homeodomain-like;,CUFF.11660.1
(903 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66466 similar to UniRef100_Q9SXV1 Cluster: KN1-type h... 1782 0.0
gnl|LJGI|TC76769 homeobox knotted-1-like protein KNOX2;homeobox ... 70 3e-11
gnl|LJGI|TC72803 UniRef100_A5Y4H1 Cluster: Class I KNOX homeobox... 70 3e-11
gnl|LJGI|BP036080 similar to UniRef100_A3QNN5 Cluster: Homeodoma... 64 2e-09
gnl|LJGI|TC70761 UniRef100_Q4VPF0 Cluster: Homeobox knotted-1-li... 64 2e-09
>gnl|LJGI|TC66466 similar to UniRef100_Q9SXV1 Cluster: KN1-type homeobox protein; n=1;
Nicotiana tabacum|Rep: KN1-type homeobox protein -
Nicotiana tabacum (Common tobacco), partial (64%)
Length = 1430
Score = 1782 bits (899), Expect = 0.0
Identities = 902/903 (99%)
Strand = Plus / Plus
Query: 1 atggaagatatttacaggatgaacccttttctatctagtccacaagatcatgttgttgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 atggaagatatttacaggatgaacccttttctatctagtccacaagatcatgttgttgcc 371
Query: 61 actgctggttcttctcaactgcatctaggccttgtggctagtaactaccttcagatggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 actgctggttcttctcaactgcatctaggccttgtggctagtaactaccttcagatggaa 431
Query: 121 gagcctgaaccgggtttgaccgggtcagaaatgtcggatcggttgatcaagagccagatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gagcctgaaccgggtttgaccgggtcagaaatgtcggatcggttgatcaagagccagatc 491
Query: 181 gcctctcaccctctttatccaaatcttgtttctgcttacatcgaatgccaaaaggttgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gcctctcaccctctttatccaaatcttgtttctgcttacatcgaatgccaaaaggttgga 551
Query: 241 gcaccgacagaactagcttcctttcttgaagaaatagcccgtgagaaccacaatagttct 300
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 gcaccgacagaactagctccctttcttgaagaaatagcccgtgagaaccacaatagttct 611
Query: 301 aatggtttcggccgtgagataggagatgatccagaacttgatgaattcatggaatcatac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 aatggtttcggccgtgagataggagatgatccagaacttgatgaattcatggaatcatac 671
Query: 361 tgcgaagttcttcagagataccaacaggagttgttcaaacccttcaatgaagcaaccttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 tgcgaagttcttcagagataccaacaggagttgttcaaacccttcaatgaagcaaccttg 731
Query: 421 tttttgtgtgatattgaatcacagttaagtgagctttgtaaaggaacactaacaatgcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 tttttgtgtgatattgaatcacagttaagtgagctttgtaaaggaacactaacaatgcca 791
Query: 481 tcagataacaaccggtcagatgaggctgctgggacatcagaggatgaattgagttgtggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 tcagataacaaccggtcagatgaggctgctgggacatcagaggatgaattgagttgtggg 851
Query: 541 aaggtggaagcggtggaatattccggcatgcgtcagggggatcaagagctaaaagaaatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 aaggtggaagcggtggaatattccggcatgcgtcagggggatcaagagctaaaagaaatg 911
Query: 601 ctccttcgtaagtatggcggttatcttagcagcttgagaaaggaatttctaaagaaaagg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 912 ctccttcgtaagtatggcggttatcttagcagcttgagaaaggaatttctaaagaaaagg 971
Query: 661 aaaaagggtaagctaccaaaggatgcaaggaaaacgcttacggattggtggaacacccac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 972 aaaaagggtaagctaccaaaggatgcaaggaaaacgcttacggattggtggaacacccac 1031
Query: 721 tataggtggccttatcctacggaggaagagaaattgcagctatcagaaatgactggactt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1032 tataggtggccttatcctacggaggaagagaaattgcagctatcagaaatgactggactt 1091
Query: 781 gatataaagcagatcaacaattggttcatcaatcagaggaaacggcattggaaaccatct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1092 gatataaagcagatcaacaattggttcatcaatcagaggaaacggcattggaaaccatct 1151
Query: 841 gaagatatgagatttgcaataatggagggtgtaagtggtggcataataggacctatgtaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1152 gaagatatgagatttgcaataatggagggtgtaagtggtggcataataggacctatgtaa 1211
Query: 901 tta 903
|||
Sbjct: 1212 tta 1214
>gnl|LJGI|TC76769 homeobox knotted-1-like protein KNOX2;homeobox transcription factor;
LjKN2
Length = 1740
Score = 69.9 bits (35), Expect = 3e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 787 aagcagatcaacaattggttcatcaatcagaggaaacggcattggaaaccatctgaaga 845
|||||||| ||||| |||||||| ||||| ||||| ||||||||||||||||||||||
Sbjct: 1395 aagcagataaacaactggttcattaatcaaaggaagaggcattggaaaccatctgaaga 1453
Score = 52.0 bits (26), Expect = 6e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 328 gatccagaacttgatgaattcatggaatcatact 361
||||||||||||||| ||||||||||| ||||||
Sbjct: 939 gatccagaacttgatcaattcatggaagcatact 972
>gnl|LJGI|TC72803 UniRef100_A5Y4H1 Cluster: Class I KNOX homeobox transcription
factor; n=1; Medicago truncatula|Rep: Class I KNOX
homeobox transcription factor - Medicago truncatula
(Barrel medic), partial (22%)
Length = 484
Score = 69.9 bits (35), Expect = 3e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 787 aagcagatcaacaattggttcatcaatcagaggaaacggcattggaaaccatctgaagat 846
|||||||| ||||| ||||||||||||||||| ||||| |||||||| || ||||| |||
Sbjct: 55 aagcagataaacaactggttcatcaatcagagaaaacgtcattggaagccttctgaggat 114
Query: 847 atg 849
|||
Sbjct: 115 atg 117
>gnl|LJGI|BP036080 similar to UniRef100_A3QNN5 Cluster: Homeodomain protein Kn1; n=1;
Prunus dulcis|Rep: Homeodomain protein Kn1 - Prunus
dulcis (Almond) (Prunus amygdalus), partial (21%)
Length = 395
Score = 63.9 bits (32), Expect = 2e-09
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 787 aagcagatcaacaattggttcatcaatcagaggaaacggcattggaaaccatctga 842
||||| || ||||| ||||| |||||||||||||||||||| |||||||| |||||
Sbjct: 309 aagcaaattaacaactggtttatcaatcagaggaaacggcactggaaaccttctga 254
>gnl|LJGI|TC70761 UniRef100_Q4VPF0 Cluster: Homeobox knotted-1-like protein KNOX3;
n=1; Lotus japonicus|Rep: Homeobox knotted-1-like
protein KNOX3 - Lotus japonicus, complete
Length = 1250
Score = 63.9 bits (32), Expect = 2e-09
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 787 aagcagatcaacaattggttcatcaatcagaggaaacggcattggaaaccatctga 842
||||| || ||||||||||| || |||||||| ||||| |||||||||||||||||
Sbjct: 855 aagcaaattaacaattggtttattaatcagagaaaacgacattggaaaccatctga 910